RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 CPA4Q9UI42 421 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 GJD2Q9UKL4 321 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 UBQLN1Q9UMX0 589 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 PIRO00625 290 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 OPHN1O60890 802 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 PSMG1O95456 288 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 SP100P23497 879 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 PGM1P36871 562 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 GNL1P36915 607 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 MATKP42679 507 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 EFHC1Q5JVL4 640 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 FBXO47Q5MNV8 452 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 NOTUMQ6P988 496 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 ZNF467Q7Z7K2 595 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 LMNTD2Q8IXW0 634 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 PYROXD2Q8N2H3 581 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 COLGALT1Q8NBJ5 622 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 WDR60Q8WVS4 1066 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 CDKL2Q92772 493 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 CCDC106Q9BWC9 280 aa16.44■□□□□ 0.22
CCHCR1-202ENST00000396263 B2RBV5 119 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 KRT36O76013 467 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 SERPINA6P08185 405 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 MMP3P08254 477 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 PDGFRBP09619 1106 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 LMO2P25791 158 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 CDC42EP1Q00587 391 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 LBRQ14739 615 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 PCBP1Q15365 356 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 CCDC6Q16204 474 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 SLC25A52Q3SY17 297 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 ARNTL2Q8WYA1 636 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 ZNF333Q96JL9 665 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 LGMNQ99538 433 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 GORASP1Q9BQQ3 440 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 GDAP2Q9NXN4 497 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 STX18Q9P2W9 335 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 TAGLN3Q9UI15 199 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 HES2Q9Y543 173 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 H3BRJ5 948 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 NVLO15381 856 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 MFSD11O43934 449 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 GLRA3O75311 464 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 GPR32O75388 356 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 RECQL4O94761 1208 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 TOP3BO95985 862 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 CD4P01730 458 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 ALDOAP04075 364 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 ENO1P06733 434 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 KITP10721 976 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 PGAM1P18669 254 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 GLUD2P49448 558 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 SLC34A1Q06495 639 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 GRB14Q14449 540 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 FASTKD1Q53R41 847 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 PACS1Q6VY07 963 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 UNC5BQ8IZJ1 945 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 NAT9Q9BTE0 207 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 NMRK1Q9NWW6 199 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 MARCOQ9UEW3 520 aaPredicted RBP16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 EMCNQ9ULC0 261 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 SORCS3Q9UPU3 1222 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 NR2E3Q9Y5X4 410 aa16.43■□□□□ 0.22
CCHCR1-202ENST00000396263 SF3B1O75533 1304 aaKnown RBP eCLIP16.43■□□□□ 0.229e-7■■■■■ 57.4
CCHCR1-202ENST00000396263 KPNA7A9QM74 516 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 F8W8V4 182 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 STRNO43815 780 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 STK10O94804 968 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 SNAI1O95863 264 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 MBLAC2Q68D91 279 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 CASC4Q6P4E1 433 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 LIMS2Q7Z4I7 341 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 FAM131BQ86XD5 332 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 PDCD7Q8N8D1 485 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 SLC2A14Q8TDB8 520 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 UCMAQ8WVF2 138 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 STMN2Q93045 179 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 ZNF560Q96MR9 790 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 DNAI2Q9GZS0 605 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 NXF3Q9H4D5 531 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 STN1Q9H668 368 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 LMCD1Q9NZU5 365 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 DLGAP2Q9P1A6 1054 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 PLA2G4CQ9UP65 541 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 ZNF638Q14966 1978 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 MANSC4A6NHS7 340 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 RRN3P2A6NIE6 340 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 CAPN9O14815 690 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 XPO1O14980 1071 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 SLC10A3P09131 477 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 CPA2P48052 419 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 SULT1E1P49888 294 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 MUM1Q2TAK8 710 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 SNX30Q5VWJ9 437 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 FOXB2Q5VYV0 432 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 ZCCHC23Q6ZST2 131 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 BNIPLQ7Z465 357 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 DEFB106AQ8N104 65 aa16.42■□□□□ 0.22
CCHCR1-202ENST00000396263 RBM15BQ8NDT2 890 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms