RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 PAFAH1B1P43034 410 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 DNA2P51530 1060 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 SLC5A3P53794 718 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 SLC25A11Q02978 314 aaKnown RBP11.87□□□□□ -0.51
RTN1-203ENST00000395090 CREMQ03060 361 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 CKAP4Q07065 602 aaKnown RBP11.87□□□□□ -0.51
RTN1-203ENST00000395090 SLC25A52Q3SY17 297 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 TXNDC11Q6PKC3 985 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 SCN4BQ8IWT1 228 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 DEFB106AQ8N104 65 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 CAPZA3Q96KX2 299 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 CFAP57Q96MR6 1250 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 RSRP1Q9BUV0 290 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 TGIF2Q9GZN2 237 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 FBXO44Q9H4M3 255 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 SCML2Q9UQR0 700 aa11.87□□□□□ -0.51
RTN1-203ENST00000395090 ZRANB2O95218 330 aaKnown RBP eCLIP11.86□□□□□ -0.51
RTN1-203ENST00000395090 TRUB2O95900 331 aaKnown RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 LTFP02788 710 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 RB1P06400 928 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 HOXB4P17483 251 aaPredicted RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 IL1R2P27930 398 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 GTF2F1P35269 517 aaKnown RBP eCLIP11.86□□□□□ -0.51
RTN1-203ENST00000395090 HDAC4P56524 1084 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 TUBB4BP68371 445 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 UBE3AQ05086 875 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 PWP1Q13610 501 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 CLUL1Q15846 466 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 HADHQ16836 314 aaKnown RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 C15orf59Q2T9L4 293 aaPredicted RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 SYPL2Q5VXT5 272 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 BSPRYQ5W0U4 402 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 TXNRD3NBQ6F5E7 133 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 CYP4V2Q6ZWL3 525 aaPredicted RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 STRADAQ7RTN6 431 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 MON1AQ86VX9 555 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 RCOR2Q8IZ40 523 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 LRRN4CLQ8ND94 238 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 CMASQ8NFW8 434 aaPredicted RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 EXD1Q8NHP7 514 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 SPPL3Q8TCT6 385 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 FAM149B1Q96BN6 582 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 PGAP3Q96FM1 320 aaPredicted RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 RNPC3Q96LT9 517 aaKnown RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 GDF15Q99988 308 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 TRIM62Q9BVG3 475 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 DDX56Q9NY93 547 aaKnown RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 RRN3Q9NYV6 651 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 USP18Q9UMW8 372 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 NAALADL1Q9UQQ1 740 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 KIAA1671Q9BY89 1806 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 COL4A4P53420 1690 aaPredicted RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 EFCAB8A8MWE9 144 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 GRXCR1A8MXD5 290 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 TEX28O15482 410 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 CTIFO43310 598 aaKnown RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 WIPF1O43516 503 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 RTN3O95197 1032 aaPredicted RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 SEC24AO95486 1093 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 CXCL14O95715 111 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 KRT7P08729 469 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 DESP17661 470 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 TFE3P19532 575 aaPredicted RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 GPR15P49685 360 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 MGAT5BQ3V5L5 792 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 ATP13A4Q4VNC1 1196 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 BOLA3Q53S33 107 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 DCAF6Q58WW2 860 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 FAM109BQ6ICB4 259 aaPredicted RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 LILRA6Q6PI73 481 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 DENND5BQ6ZUT9 1274 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 SCD5Q86SK9 330 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 RELL1Q8IUW5 271 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 TCEAL8Q8IYN2 117 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 SPATA4Q8NEY3 305 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 FAM172AQ8WUF8 416 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 TBCBQ99426 244 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 SOX17Q9H6I2 414 aaPredicted RBP11.86□□□□□ -0.51
RTN1-203ENST00000395090 PCDHGB7Q9Y5F8 929 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 PCDHA11Q9Y5I1 949 aa11.86□□□□□ -0.51
RTN1-203ENST00000395090 PATJQ8NI35 1801 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 CTAGE15A4D2H0 777 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 PGRMC1O00264 195 aaKnown RBP11.85□□□□□ -0.51
RTN1-203ENST00000395090 PAGE1O75459 146 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 TADA3O75528 432 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 ARHGEF15O94989 841 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 C1RP00736 705 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 CNPP09543 421 aaKnown RBP11.85□□□□□ -0.51
RTN1-203ENST00000395090 CTAGE8P0CG41 777 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 MYOGP15173 224 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 ATF6P18850 670 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 SSR1P43307 286 aaKnown RBP11.85□□□□□ -0.51
RTN1-203ENST00000395090 ARL4DP49703 201 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 ERVFC1P60507 584 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 EIF4EBP2Q13542 120 aaPredicted RBP11.85□□□□□ -0.51
RTN1-203ENST00000395090 TAZQ16635 292 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 RAB6CQ53S08 254 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 CCDC181Q5TID7 509 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 SDHAF4Q5VUM1 108 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 OTUD1Q5VV17 481 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms