RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 CHI3L2Q15782 390 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 TAC4Q86UU9 113 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 TMEM237Q96Q45 408 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 ECT2Q9H8V3 914 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 IARS2Q9NSE4 1012 aaKnown RBP16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 LOC102724159A0A0B4J2E5 919 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 RBM47A0AV96 593 aaKnown RBP16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 CXorf49A8MYA2 514 aaPredicted RBP16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 ALOX15BO15296 676 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 DNAJC6O75061 913 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 SNRPAP09012 282 aaKnown RBP16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 EZRP15311 586 aaKnown RBP16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 GPX6P59796 221 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 PWP2Q15269 919 aaKnown RBP16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 KIAA0319Q5VV43 1072 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 RAP1GAP2Q684P5 730 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 CMC1Q7Z7K0 106 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 TOP6BLQ8N6T0 577 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 UBR7Q8N806 425 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 TLK1Q9UKI8 766 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 MBLAC1A4D2B0 266 aaPredicted RBP16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 NEMP1O14524 444 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 PRRG1O14668 218 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 MAGEA9P43362 315 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 MSL3Q8N5Y2 521 aaKnown RBP16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 HNRNPABQ99729 332 aaKnown RBP16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 FAM8A1Q9UBU6 413 aa16.34■□□□□ 0.21
SMARCD1-202ENST00000394963 C3orf70A6NLC5 250 aaPredicted RBP16.33■□□□□ 0.21
SMARCD1-202ENST00000394963 KPNA6O60684 536 aa16.33■□□□□ 0.21
SMARCD1-202ENST00000394963 SERPINB6P35237 376 aa16.33■□□□□ 0.21
SMARCD1-202ENST00000394963 KDSRQ06136 332 aa16.33■□□□□ 0.21
SMARCD1-202ENST00000394963 ACAP1Q15027 740 aa16.33■□□□□ 0.21
SMARCD1-202ENST00000394963 LRRTM3Q86VH5 581 aa16.33■□□□□ 0.21
SMARCD1-202ENST00000394963 FCRL2Q96LA5 508 aaPredicted RBP16.33■□□□□ 0.21
SMARCD1-202ENST00000394963 TSSK1BQ9BXA7 367 aa16.33■□□□□ 0.21
SMARCD1-202ENST00000394963 CAB39LQ9H9S4 337 aa16.33■□□□□ 0.21
SMARCD1-202ENST00000394963 ZBTB24O43167 697 aaPredicted RBP16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 ALDH1A1P00352 501 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 CDH5P33151 784 aaPredicted RBP16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 CORO7P57737 925 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 EFHBQ8N7U6 833 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 OR10T2Q8NGX3 314 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 AUTS2Q8WXX7 1259 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 ZNF395Q9H8N7 513 aaPredicted RBP16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 CYP4F11Q9HBI6 524 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 SARS2Q9NP81 518 aaKnown RBP16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 CDH9Q9ULB4 789 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 GABBR2O75899 941 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 DRD4P21917 467 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 CYP2C18P33260 490 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 ALDH18A1P54886 795 aaKnown RBP16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 DAOAP59103 153 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 CRYBG2Q8N1P7 616 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 KCNV2Q8TDN2 545 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 DQX1Q8TE96 717 aaKnown RBP16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 RMDN1Q96DB5 314 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 ARMCX1Q9P291 453 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 HAO1Q9UJM8 370 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 GIT1Q9Y2X7 761 aa16.33■□□□□ 0.2
SMARCD1-202ENST00000394963 SDR42E2A6NKP2 422 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 CCT8L1PA6NM43 557 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 NDC80O14777 642 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 DIAPH2O60879 1101 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 VSTM1Q6UX27 236 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 C16orf59Q7L2K0 433 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 TNS4Q8IZW8 715 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 SEC14L1Q92503 715 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 MFSD3Q96ES6 412 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 ZNF670Q9BS34 389 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 FICDQ9BVA6 458 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 TRIM55Q9BYV6 548 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 MAF1Q9H063 256 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 MANSC1Q9H8J5 431 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 A8MX80 341 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 TRABD2AQ86V40 505 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 ZDHHC17Q8IUH5 632 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 BLOC1S5Q8TDH9 187 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 TLCD1Q96CP7 247 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 NCAPGQ9BPX3 1015 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 CREBZFQ9NS37 354 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 SYBUQ9NX95 663 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 CDY1Q9Y6F8 540 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 MT-CO1P00395 513 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 CKBP12277 381 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 CCR1P32246 355 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 PPM1JQ5JR12 505 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 RFWD3Q6PCD5 774 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 STRA8Q7Z7C7 330 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 DCP1BQ8IZD4 617 aaKnown RBP16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 NIPA2Q8N8Q9 360 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 RSPH1Q8WYR4 309 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 DERAQ9Y315 318 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 CLUHO75153 1309 aa16.32■□□□□ 0.2
SMARCD1-202ENST00000394963 TRIP11Q15643 1979 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 LOC100653049A0A140TA62 436 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 UBA6A0AVT1 1052 aaPredicted RBP16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 PHGDHO43175 533 aaKnown RBP16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 PAGE1O75459 146 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 KRT34O76011 436 aa16.31■□□□□ 0.2
SMARCD1-202ENST00000394963 VAPBO95292 243 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms