RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 PPP1R16AQ96I34 528 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 ZBTB45Q96K62 511 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-203ENST00000394872 PAPOLBQ9NRJ5 636 aaKnown RBP10.62□□□□□ -0.71
COL4A6-203ENST00000394872 TRHDEQ9UKU6 1024 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 SNX13Q9Y5W8 968 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 KANSL1LA0AUZ9 987 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 ATP6V1B1P15313 513 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 SOX6P35712 828 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 KDM7AQ6ZMT4 941 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 USP45Q70EL2 814 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 FBXO39Q8N4B4 442 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 ZNF558Q96NG5 402 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 PCDH9Q9HC56 1237 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 ABCC13Q9NSE7 274 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 HAO1Q9UJM8 370 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 TRAV19A0A0A6YYK7 116 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 ZNF839A8K0R7 811 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 AGRPO00253 132 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 RGS5O15539 181 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 NUDT14O95848 222 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 PGAM1P18669 254 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 TYMPP19971 482 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 ATP6V1C1P21283 382 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 NPY2RP49146 381 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 RCN1Q15293 331 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 CCDC149Q6ZUS6 474 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 BRSK2Q8IWQ3 736 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 MCOLN3Q8TDD5 553 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 REPS1Q96D71 796 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 TMEM120AQ9BXJ8 343 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 PRRG3Q9BZD7 231 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 RNF19AQ9NV58 838 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-203ENST00000394872 LTFP02788 710 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 PAEPP09466 180 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 CTNNB1P35222 781 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 FKBP1AP62942 108 aaKnown RBP10.61□□□□□ -0.71
COL4A6-203ENST00000394872 MAD2L1Q13257 205 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-203ENST00000394872 CELF3Q5SZQ8 465 aaKnown RBP10.61□□□□□ -0.71
COL4A6-203ENST00000394872 ZNF544Q6NX49 715 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 NECAB2Q7Z6G3 386 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 SENP8Q96LD8 212 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 BBS4Q96RK4 519 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 POPDC2Q9HBU9 364 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 TK2O00142 265 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 MSCO60682 206 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 ENO2P09104 434 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-203ENST00000394872 PTPRAP18433 802 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 TRAF2Q12933 501 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 ITIH4Q14624 930 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 PKN2Q16513 984 aaKnown RBP10.61□□□□□ -0.71
COL4A6-203ENST00000394872 PABPC1LQ4VXU2 614 aaKnown RBP10.61□□□□□ -0.71
COL4A6-203ENST00000394872 AGKQ53H12 422 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 FIGNQ5HY92 759 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 OLFML2BQ68BL8 750 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 CYP4Z2PQ8N1L4 340 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 CXorf40AQ8TE69 158 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 PRKD2Q9BZL6 878 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 A1CFQ9NQ94 594 aaKnown RBP10.61□□□□□ -0.71
COL4A6-203ENST00000394872 TAS2R13Q9NYV9 303 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 NUDT5Q9UKK9 219 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 GAKO14976 1311 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 CLTBP09497 229 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 SCNN1GP51170 649 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 C16orf72Q14CZ0 275 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 NCF4Q15080 339 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 CXCL17Q6UXB2 119 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 SCUBE1Q8IWY4 988 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 REXO1L1PQ8IX06 675 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 CLYBLQ8N0X4 340 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 KIAA0895Q8NCT3 520 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 UROC1Q96N76 676 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 TBCBQ99426 244 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 SLC40A1Q9NP59 571 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL4A6-203ENST00000394872 CAPN15O75808 1086 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 MT-CO1P00395 513 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 CRABP2P29373 138 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 FMO4P31512 558 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 MMP13P45452 471 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 INHBEP58166 350 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 APOBEC3HQ6NTF7 200 aaKnown RBP10.61□□□□□ -0.71
COL4A6-203ENST00000394872 RIOX2Q8IUF8 465 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 HOMEZQ8IX15 550 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 DPP10Q8N608 796 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 PPP1R13LQ8WUF5 828 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 MTERF3Q96E29 417 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 TINF2Q9BSI4 451 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 NMRAL1Q9HBL8 299 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 TMBIM4Q9HC24 238 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 FAM153AQ9UHL3 310 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 SLC24A2Q9UI40 661 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 ZMYM5Q9UJ78 669 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 ZNF112Q9UJU3 913 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 ZMYM2Q9UBW7 1377 aa10.61□□□□□ -0.71
COL4A6-203ENST00000394872 NRCAMQ92823 1304 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 MOXD2PA6NHM9 499 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 TM9SF1O15321 606 aa10.6□□□□□ -0.71
COL4A6-203ENST00000394872 CNPP09543 421 aaKnown RBP10.6□□□□□ -0.71
COL4A6-203ENST00000394872 GRK2P25098 689 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms