RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 TMEM169Q96HH4 297 aa12.98□□□□□ -0.33
SSH2-203ENST00000394848 C9orf72Q96LT7 481 aa12.98□□□□□ -0.33
SSH2-203ENST00000394848 TGS1Q96RS0 853 aaKnown RBP12.98□□□□□ -0.33
SSH2-203ENST00000394848 HAPLN3Q96S86 360 aa12.98□□□□□ -0.33
SSH2-203ENST00000394848 LGMNQ99538 433 aa12.98□□□□□ -0.33
SSH2-203ENST00000394848 TMEM109Q9BVC6 243 aa12.98□□□□□ -0.33
SSH2-203ENST00000394848 VN1R3Q9BXE9 311 aa12.98□□□□□ -0.33
SSH2-203ENST00000394848 SIK2Q9H0K1 926 aa12.98□□□□□ -0.33
SSH2-203ENST00000394848 LRRC4CQ9HCJ2 640 aa12.98□□□□□ -0.33
SSH2-203ENST00000394848 RAB6BQ9NRW1 208 aa12.98□□□□□ -0.33
SSH2-203ENST00000394848 COMMD8Q9NX08 183 aa12.98□□□□□ -0.33
SSH2-203ENST00000394848 GMIPQ9P107 970 aa12.98□□□□□ -0.33
SSH2-203ENST00000394848 STK39Q9UEW8 545 aa12.98□□□□□ -0.33
SSH2-203ENST00000394848 XPO7Q9UIA9 1087 aaKnown RBP12.98□□□□□ -0.33
SSH2-203ENST00000394848 SNX10Q9Y5X0 201 aa12.98□□□□□ -0.33
SSH2-203ENST00000394848 CHD7Q9P2D1 2997 aa12.98□□□□□ -0.33
SSH2-203ENST00000394848 TCRBV7S3A2A0A539 114 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 C5orf60A6NFR6 353 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 ALOX15BO15296 676 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 MSI1O43347 362 aaKnown RBP12.97□□□□□ -0.33
SSH2-203ENST00000394848 FGF18O76093 207 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 LRIG2O94898 1065 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 RPL17P18621 184 aaKnown RBP12.97□□□□□ -0.33
SSH2-203ENST00000394848 DNAJB2P25686 324 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 EPHB2P29323 1055 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 ARL4CP56559 192 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 PPP2R5DQ14738 602 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 HIF1AQ16665 826 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 SKIDA1Q1XH10 827 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 FAM182AQ5T1J6 154 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 C6orf118Q5T5N4 469 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 AGBL2Q5U5Z8 902 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 DDX53Q86TM3 631 aaKnown RBP12.97□□□□□ -0.33
SSH2-203ENST00000394848 KLHL23Q8NBE8 558 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 CCNYQ8ND76 341 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 CCDC110Q8TBZ0 833 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 HTR3CQ8WXA8 447 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 EXOC4Q96A65 974 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 SERPINB11Q96P15 392 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 FERMT1Q9BQL6 677 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 C17orf80Q9BSJ5 609 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 ROPN1BQ9BZX4 212 aaPredicted RBP12.97□□□□□ -0.33
SSH2-203ENST00000394848 NKX2-4Q9H2Z4 354 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 SLC28A3Q9HAS3 691 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 ROPN1Q9HAT0 212 aaPredicted RBP12.97□□□□□ -0.33
SSH2-203ENST00000394848 WDR27A2RRH5 827 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 RASGRF2O14827 1237 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 PPP1R12AO14974 1030 aaPredicted RBP12.97□□□□□ -0.33
SSH2-203ENST00000394848 SOD2P04179 222 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 SRGAP2BP0DMP2 458 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 CTNNB1P35222 781 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 TUFMP49411 452 aaKnown RBP12.97□□□□□ -0.33
SSH2-203ENST00000394848 PSEN1P49768 467 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 GAD2Q05329 585 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 AP1B1Q10567 949 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 TAF10Q12962 218 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 PDIA2Q13087 525 aaKnown RBP12.97□□□□□ -0.33
SSH2-203ENST00000394848 HP1BP3Q5SSJ5 553 aaPredicted RBP12.97□□□□□ -0.33
SSH2-203ENST00000394848 MSANTD2Q6P1R3 559 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 SPRED2Q7Z698 418 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 NETO2Q8NC67 525 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 GIPC2Q8TF65 315 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 TTC25Q96NG3 672 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 KLC2Q9H0B6 622 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 PRDM12Q9H4Q4 367 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 TLR8Q9NR97 1041 aaKnown RBP12.97□□□□□ -0.33
SSH2-203ENST00000394848 CLIC5Q9NZA1 410 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 LZTS1Q9Y250 596 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 RAD54BQ9Y620 910 aa12.97□□□□□ -0.33
SSH2-203ENST00000394848 NLRC5Q86WI3 1866 aa12.96□□□□□ -0.33
SSH2-203ENST00000394848 KCNU1A8MYU2 1149 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 CHADO15335 359 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 NCAM2O15394 837 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 PAGE1O75459 146 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 TMEM63AO94886 807 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 SLC2A3P11169 496 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 GLUD2P49448 558 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 KCNJ11Q14654 390 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 PRKD1Q15139 912 aaPredicted RBP12.96□□□□□ -0.34
SSH2-203ENST00000394848 FNBP1LQ5T0N5 605 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 PPP2R2DQ66LE6 453 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 ZBED8Q8IZ13 594 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 PDIK1LQ8N165 341 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 TIFAQ96CG3 184 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 PGM2Q96G03 612 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 FCRL2Q96LA5 508 aaPredicted RBP12.96□□□□□ -0.34
SSH2-203ENST00000394848 CLSTN3Q9BQT9 956 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 CCDC77Q9BR77 488 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 PHACTR1Q9C0D0 580 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 ETNK1Q9HBU6 452 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 NOVA2Q9UNW9 492 aaKnown RBP12.96□□□□□ -0.34
SSH2-203ENST00000394848 TLR6Q9Y2C9 796 aa12.96□□□□□ -0.34
SSH2-203ENST00000394848 SMIM23A6NLE4 172 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 SLC38A8A6NNN8 435 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 EIF3HO15372 352 aaKnown RBP eCLIP12.95□□□□□ -0.34
SSH2-203ENST00000394848 RGS16O15492 202 aaPredicted RBP12.95□□□□□ -0.34
SSH2-203ENST00000394848 STK10O94804 968 aaKnown RBP12.95□□□□□ -0.34
SSH2-203ENST00000394848 VAV1P15498 845 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 SLCO1A2P46721 670 aa12.95□□□□□ -0.34
SSH2-203ENST00000394848 TBX4P57082 545 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms