RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 E7ENQ6 273 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 APOL1O14791 398 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 FAM163BP0C2L3 166 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 BGNP21810 368 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 WDR78Q5VTH9 848 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 MARK2Q7KZI7 788 aaKnown RBP16■□□□□ 0.15
PTBP1-204ENST00000394601 TTC39CQ8N584 583 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 ENDOVQ8N8Q3 282 aaKnown RBP16■□□□□ 0.15
PTBP1-204ENST00000394601 CCDC110Q8TBZ0 833 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 SKA1Q96BD8 255 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 MTBPQ96DY7 904 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 PTCD3Q96EY7 689 aaKnown RBP16■□□□□ 0.15
PTBP1-204ENST00000394601 SIKE1Q9BRV8 207 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 PLEKHA5Q9HAU0 1116 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 RNF19AQ9NV58 838 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 ZNF180Q9UJW8 692 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 HES2Q9Y543 173 aa16■□□□□ 0.15
PTBP1-204ENST00000394601 H7C0C1 242 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 SPTLC1O15269 473 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 MMP3P08254 477 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 ANPEPP15144 967 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 PTPN9P43378 593 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 ATP5OP48047 213 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 AP1B1Q10567 949 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 STILQ15468 1287 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 OTUD1Q5VV17 481 aaPredicted RBP15.99■□□□□ 0.15
PTBP1-204ENST00000394601 ARCQ7LC44 396 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 ZNF410Q86VK4 478 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 FAM111AQ96PZ2 611 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.99■□□□□ 0.15
PTBP1-204ENST00000394601 HEY1Q9Y5J3 304 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 SNX9Q9Y5X1 595 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 FOXD2O60548 495 aaPredicted RBP15.99■□□□□ 0.15
PTBP1-204ENST00000394601 LPXNO60711 386 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 GCATO75600 419 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 MSX2P35548 267 aaPredicted RBP15.99■□□□□ 0.15
PTBP1-204ENST00000394601 C1QTNF12Q5T7M4 302 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 ZNF618Q5T7W0 954 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 BNIPLQ7Z465 357 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 MCUQ8NE86 351 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 TSSK1BQ9BXA7 367 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 KLHL4Q9C0H6 718 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 ANLNQ9NQW6 1124 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 PEX1O43933 1283 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 SPAG6O75602 509 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 ITGA2BP08514 1039 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 CYP2F1P24903 491 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 LMO2P25791 158 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 GRIA1P42261 906 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 BCAR1P56945 870 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 DLG1Q12959 904 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 CDC16Q13042 620 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 KIZQ2M2Z5 673 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 UNC5AQ6ZN44 842 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 SLC26A11Q86WA9 606 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 NAT14Q8WUY8 206 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 OLFM3Q96PB7 478 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 KCTD15Q96SI1 283 aaPredicted RBP15.99■□□□□ 0.15
PTBP1-204ENST00000394601 ECSITQ9BQ95 431 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 MECRQ9BV79 373 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 NGRNQ9NPE2 291 aaKnown RBP15.99■□□□□ 0.15
PTBP1-204ENST00000394601 ANGPTL2Q9UKU9 493 aa15.99■□□□□ 0.15
PTBP1-204ENST00000394601 FAF1Q9UNN5 650 aaPredicted RBP15.99■□□□□ 0.15
PTBP1-204ENST00000394601 FCHO1O14526 889 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 KLF11O14901 512 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 TGDSO95455 350 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 GSRP00390 522 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 CSH1P0DML2 217 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 CSH2P0DML3 217 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 ADARP55265 1226 aaKnown RBP15.98■□□□□ 0.15
PTBP1-204ENST00000394601 TTLL12Q14166 644 aaPredicted RBP15.98■□□□□ 0.15
PTBP1-204ENST00000394601 KRT81Q14533 505 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 PPP6R3Q5H9R7 873 aaPredicted RBP15.98■□□□□ 0.15
PTBP1-204ENST00000394601 TMCO4Q5TGY1 634 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 C9orf57Q5W0N0 161 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 TRMT10BQ6PF06 316 aaKnown RBP15.98■□□□□ 0.15
PTBP1-204ENST00000394601 ZNF467Q7Z7K2 595 aaPredicted RBP15.98■□□□□ 0.15
PTBP1-204ENST00000394601 SDCCAG8Q86SQ7 713 aaPredicted RBP15.98■□□□□ 0.15
PTBP1-204ENST00000394601 SESTD1Q86VW0 696 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 CTAGE3PQ8IX95 158 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 CCDC185Q8N715 623 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 MS4A4AQ96JQ5 239 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 SLC13A1Q9BZW2 595 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 PHF24Q9UPV7 400 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 NR2E3Q9Y5X4 410 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 IQANK1A0A1B0GTG1 560 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 PIRO00625 290 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 SLC25A3Q00325 362 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 TCHHL1Q5QJ38 904 aaPredicted RBP15.98■□□□□ 0.15
PTBP1-204ENST00000394601 SCYL2Q6P3W7 929 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 SLC26A9Q7LBE3 791 aa15.98■□□□□ 0.15
PTBP1-204ENST00000394601 FAM159BA6NKW6 160 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 ZMPSTE24O75844 475 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 MT-ND3P03897 115 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 IMPDH2P12268 514 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 CCDC130P13994 396 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 SDC4P31431 198 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 YWHAGP61981 247 aaKnown RBP eCLIP15.97■□□□□ 0.15
PTBP1-204ENST00000394601 TRIP12Q14669 1992 aaPredicted RBP15.97■□□□□ 0.15
PTBP1-204ENST00000394601 CYTH1Q15438 398 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms