RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 HLA-BQ31612 363 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 FAM133BQ5BKY9 247 aaKnown RBP18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 MBLAC2Q68D91 279 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 CCNI2Q6ZMN8 369 aaPredicted RBP18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 BEND5Q7L4P6 421 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 PROSER1Q86XN7 944 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 FIBINQ8TAL6 211 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 TTC17Q96AE7 1141 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 LMLNQ96KR4 655 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 CDC6Q99741 560 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 DDX50Q9BQ39 737 aaKnown RBP18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 BTBD1Q9H0C5 482 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 SGK2Q9HBY8 427 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 PRSS16Q9NQE7 514 aa18.19■□□□□ 0.5
SNRPA1-202ENST00000394082 NBEAQ8NFP9 2946 aa18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 GOLGA6L4A6NEF3 574 aa18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 SART1O43290 800 aaKnown RBP18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 MSI1O43347 362 aaKnown RBP18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 ACSL4O60488 711 aa18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 LTFP02788 710 aa18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 DNTTP04053 509 aa18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 ASLP04424 464 aa18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 LCP1P13796 627 aa18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 POLR2EP19388 210 aaKnown RBP18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 RPS14P62263 151 aaKnown RBP18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 GCNT1Q02742 428 aa18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 SUZ12Q15022 739 aaKnown RBP18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 TEAD4Q15561 434 aa18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 MEA1Q16626 185 aa18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 TTC31Q49AM3 519 aaPredicted RBP18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 USP30Q70CQ3 517 aa18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 LMO3Q8TAP4 145 aa18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 CYB5D2Q8WUJ1 264 aa18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 RSPH9Q9H1X1 276 aaPredicted RBP18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 C6orf106Q9H6K1 298 aaPredicted RBP18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 FNDC3AQ9Y2H6 1198 aaKnown RBP18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 LAMA5O15230 3695 aa18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 ANKRD11Q6UB99 2663 aaPredicted RBP18.18■□□□□ 0.5
SNRPA1-202ENST00000394082 TRIM49BA6NDI0 452 aa18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 SEMA4FO95754 770 aa18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 CD27P26842 260 aa18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 SGSHP51688 502 aa18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 TBX4P57082 545 aa18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 SFSWAPQ12872 951 aaKnown RBP18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 LRMPQ12912 555 aa18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 ZNF776Q68DI1 518 aaPredicted RBP18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 HJURPQ8NCD3 748 aaPredicted RBP18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 SERPINB11Q96P15 392 aa18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 ZSWIM1Q9BR11 485 aa18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 TRIM62Q9BVG3 475 aa18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 IL21RQ9HBE5 538 aa18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 CNTN6Q9UQ52 1028 aa18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 TLR6Q9Y2C9 796 aa18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 PCDHB4Q9Y5E5 795 aa18.17■□□□□ 0.5
SNRPA1-202ENST00000394082 ZFYVE26Q68DK2 2539 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 TYW5A2RUC4 315 aaKnown RBP18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 M0QYV0 167 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 RNF225M0QZC1 329 aaPredicted RBP18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 PAPSS1O43252 624 aaPredicted RBP18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 PCDHGA12O60330 932 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 DFNA5O60443 496 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 TBL1XO60907 577 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 SLC6A4P31645 630 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 CD70P32970 193 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 CSNK1EP49674 416 aaKnown RBP18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 RFWD3Q6PCD5 774 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 SLCO6A1Q86UG4 719 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 FAM124AQ86V42 546 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 MFN1Q8IWA4 741 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 PPM1KQ8N3J5 372 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 WFDC5Q8TCV5 224 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 SETD7Q8WTS6 366 aaKnown RBP18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 STK32AQ8WU08 396 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 IGSF8Q969P0 613 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 BIRC7Q96CA5 298 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 MYO19Q96H55 970 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 SLC39A13Q96H72 371 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 TM9SF3Q9HD45 589 aa18.16■□□□□ 0.5
SNRPA1-202ENST00000394082 A0A1B0GVT2 93 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 TAF4O00268 1085 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 FYNP06241 537 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 ACADSBP45954 432 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 RGS7P49802 495 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 ST8SIA6P61647 398 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 SCAPQ12770 1279 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 KIF19Q2TAC6 998 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 HNRNPA1L2Q32P51 320 aaKnown RBP18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 TTI2Q6NXR4 508 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 LRSAM1Q6UWE0 723 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 CACUL1Q86Y37 369 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 FCRL2Q96LA5 508 aaPredicted RBP18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 TOR4AQ9NXH8 423 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 DKK4Q9UBT3 224 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 RALYQ9UKM9 306 aaKnown RBP18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 TPX2Q9ULW0 747 aaKnown RBP18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 NCKAP1Q9Y2A7 1128 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 ANKRD6Q9Y2G4 727 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 ITPR1Q14643 2758 aa18.15■□□□□ 0.5
SNRPA1-202ENST00000394082 NUMA1Q14980 2115 aa18.14■□□□□ 0.5
SNRPA1-202ENST00000394082 TARSL2A2RTX5 802 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms