RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 KHDC1Q4VXA5 237 aaKnown RBP19.57■□□□□ 0.72
CCDC50-202ENST00000392456 TXNRD3NBQ6F5E7 133 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 TRNP1Q6NT89 227 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 FAM183BPQ6ZVS7 135 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 DDX42Q86XP3 938 aaKnown RBP eCLIP19.57■□□□□ 0.72
CCDC50-202ENST00000392456 ZBED8Q8IZ13 594 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 PPFIBP2Q8ND30 876 aa19.57■□□□□ 0.72
CCDC50-202ENST00000392456 TCRBV7S2A1N4TA0A589 114 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 CPA3P15088 417 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 DSC1Q08554 894 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 MDH1BQ5I0G3 518 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 ARFGAP1Q8N6T3 406 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 UBL4BQ8N7F7 174 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 ANKRD52Q8NB46 1076 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 MCRS1Q96EZ8 462 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 TMEM30AQ9NV96 361 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 TMEM161AQ9NX61 479 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 CLIC5Q9NZA1 410 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 NDUFA13Q9P0J0 144 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 STRIP2Q9ULQ0 834 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 PGRMC1O00264 195 aaKnown RBP19.56■□□□□ 0.72
CCDC50-202ENST00000392456 MAP3K7O43318 606 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 STK10O94804 968 aaKnown RBP19.56■□□□□ 0.72
CCDC50-202ENST00000392456 CTNNA2P26232 953 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 SLC34A1Q06495 639 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 RAB6CQ53S08 254 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 B3GNT6Q6ZMB0 384 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 BPHLQ86WA6 291 aaPredicted RBP19.56■□□□□ 0.72
CCDC50-202ENST00000392456 CLEC4CQ8WTT0 213 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 SEPT8Q92599 483 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 ARMC5Q96C12 935 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 HERPUD2Q9BSE4 406 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 SLC4A5Q9BY07 1137 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 RAB6CQ9H0N0 254 aa19.56■□□□□ 0.72
CCDC50-202ENST00000392456 TTC3P53804 2025 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 SMIM23A6NLE4 172 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 E9PBE3 544 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 MATN2O00339 956 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 FBP2O00757 339 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 EPHB2P29323 1055 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 GJC1P36383 396 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 STILQ15468 1287 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 DEPDC1Q5TB30 811 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 OR6B2Q6IFH4 312 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 ANKS1BQ7Z6G8 1248 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 COLGALT2Q8IYK4 626 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 CRIPAKQ8N1N5 446 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 BBS5Q8N3I7 341 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 TNIP3Q96KP6 325 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 TMEM209Q96SK2 561 aa19.55■□□□□ 0.72
CCDC50-202ENST00000392456 PRG3Q9Y2Y8 225 aaPredicted RBP19.55■□□□□ 0.72
CCDC50-202ENST00000392456 TTI1O43156 1089 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 PAPSS1O43252 624 aaPredicted RBP19.54■□□□□ 0.72
CCDC50-202ENST00000392456 ITGB8P26012 769 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 GRIA2P42262 883 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 CCR3P51677 355 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 NEK3P51956 506 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 LRRC26Q2I0M4 334 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 FAM102AQ5T9C2 384 aaPredicted RBP19.54■□□□□ 0.72
CCDC50-202ENST00000392456 SH3PXD2AQ5TCZ1 1133 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 NUP93Q8N1F7 819 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 KHSRPQ92945 711 aaKnown RBP eCLIP19.54■□□□□ 0.728e-9■■□□□ 13.5
CCDC50-202ENST00000392456 ACSF2Q96CM8 615 aaPredicted RBP19.54■□□□□ 0.72
CCDC50-202ENST00000392456 RHOBTB2Q9BYZ6 727 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 KRT82Q9NSB4 513 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 KLHL11Q9NVR0 708 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 LAMA3Q16787 3333 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 TCP11X1B4DZS4 312 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 SLC1A1P43005 524 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 OR1G1P47890 313 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 FXNQ16595 210 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 NDRG1Q92597 394 aaKnown RBP19.54■□□□□ 0.72
CCDC50-202ENST00000392456 SLC7A6OSQ96CW6 309 aaPredicted RBP19.54■□□□□ 0.72
CCDC50-202ENST00000392456 DGCR14Q96DF8 476 aaKnown RBP19.54■□□□□ 0.72
CCDC50-202ENST00000392456 TOX2Q96NM4 488 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 IP6K2Q9UHH9 426 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 TBX21Q9UL17 535 aa19.54■□□□□ 0.72
CCDC50-202ENST00000392456 KRIT1O00522 736 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 CXCL10P02778 98 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 RXRGP48443 463 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 SPDYCQ5MJ68 293 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 C6orf183Q5T699 404 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 TMEM214Q6NUQ4 689 aaKnown RBP19.53■□□□□ 0.72
CCDC50-202ENST00000392456 DCLRE1AQ6PJP8 1040 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 TMCO5AQ8N6Q1 288 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 PCED1BQ96HM7 432 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 CASD1Q96PB1 797 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 DDX47Q9H0S4 455 aaKnown RBP19.53■□□□□ 0.72
CCDC50-202ENST00000392456 PCDHB7Q9Y5E2 793 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 M0QZQ0 153 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 OR6B1O95007 311 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 PBX3P40426 434 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 BST2Q10589 180 aaKnown RBP19.53■□□□□ 0.72
CCDC50-202ENST00000392456 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.53■□□□□ 0.72
CCDC50-202ENST00000392456 PATL1Q86TB9 770 aaKnown RBP19.53■□□□□ 0.72
CCDC50-202ENST00000392456 TMEM86AQ8N2M4 240 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.53■□□□□ 0.72
CCDC50-202ENST00000392456 TRPC7Q9HCX4 862 aa19.53■□□□□ 0.72
CCDC50-202ENST00000392456 HGSO14964 777 aaPredicted RBP19.52■□□□□ 0.72
CCDC50-202ENST00000392456 ADAM23O75077 832 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms