RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 RETP07949 1114 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 OXCT1P55809 520 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 NME3Q13232 169 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 CDH18Q13634 790 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 NR1I3Q14994 352 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 ELF2Q15723 593 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 CLEC16AQ2KHT3 1053 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 SLC25A52Q3SY17 297 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 RAP1GAP2Q684P5 730 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 MMS22LQ6ZRQ5 1243 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 CHST9Q7L1S5 443 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 PHF13Q86YI8 300 aaPredicted RBP13.12□□□□□ -0.31
GGPS1-203ENST00000391855 OLIG1Q8TAK6 271 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 FIBINQ8TAL6 211 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 BAP1Q92560 729 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 MS4A3Q96HJ5 214 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 ZC3H10Q96K80 434 aaKnown RBP13.12□□□□□ -0.31
GGPS1-203ENST00000391855 AGPAT1Q99943 283 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 C11orf70Q9BRQ4 267 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 ABCB8Q9NUT2 735 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 POLR3BQ9NW08 1133 aaPredicted RBP13.12□□□□□ -0.31
GGPS1-203ENST00000391855 COX16Q9P0S2 106 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 TMEM59LQ9UK28 342 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 CLEC4EQ9ULY5 219 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 STON1Q9Y6Q2 735 aa13.12□□□□□ -0.31
GGPS1-203ENST00000391855 A0A1B0GVM2 712 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 A0A1W2PQF6 199 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 TCAF2A6NFQ2 919 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 RHOBTB1O94844 696 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 MOCS3O95396 460 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 ASLP04424 464 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 TPM3P06753 285 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 CXCR3P49682 368 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 SGSHP51688 502 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 RNASE9P60153 205 aaKnown RBP13.11□□□□□ -0.31
GGPS1-203ENST00000391855 RPS24P62847 133 aaKnown RBP13.11□□□□□ -0.31
GGPS1-203ENST00000391855 FANCCQ00597 558 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 DEUP1Q05D60 604 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 SRSF5Q13243 272 aaKnown RBP13.11□□□□□ -0.31
GGPS1-203ENST00000391855 SLC12A1Q13621 1099 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 ASIC2Q16515 512 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 OTUD1Q5VV17 481 aaPredicted RBP13.11□□□□□ -0.31
GGPS1-203ENST00000391855 LGI2Q8N0V4 545 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 FAM160A2Q8N612 972 aaPredicted RBP13.11□□□□□ -0.31
GGPS1-203ENST00000391855 NAP1L5Q96NT1 182 aaPredicted RBP13.11□□□□□ -0.31
GGPS1-203ENST00000391855 PPP1R9BQ96SB3 815 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 ACOX2Q99424 681 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 TPSD1Q9BZJ3 242 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 WDCPQ9H6R7 721 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 ZDHHC4Q9NPG8 344 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 SEPT11Q9NVA2 429 aaKnown RBP13.11□□□□□ -0.31
GGPS1-203ENST00000391855 CACNA2D2Q9NY47 1150 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 ADAM22Q9P0K1 906 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 STIM2Q9P246 746 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 XPO7Q9UIA9 1087 aaKnown RBP13.11□□□□□ -0.31
GGPS1-203ENST00000391855 PCDHGA5Q9Y5G8 931 aa13.11□□□□□ -0.31
GGPS1-203ENST00000391855 H0Y626 953 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 SYNCRIPO60506 623 aaKnown RBP13.1□□□□□ -0.31
GGPS1-203ENST00000391855 ZNF217O75362 1048 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 EPN2O95208 641 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 DLDP09622 509 aaKnown RBP13.1□□□□□ -0.31
GGPS1-203ENST00000391855 HOXC13P31276 330 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 RDXP35241 583 aaKnown RBP13.1□□□□□ -0.31
GGPS1-203ENST00000391855 FLT3P36888 993 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 P2RY2P41231 377 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 IL12RB1P42701 662 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 WASP42768 502 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 UBASH3AP57075 661 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 ZNF234Q14588 700 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 MBLAC2Q68D91 279 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 SERPINA13PQ6UXR4 307 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 ADIPOR2Q86V24 386 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 PGBD3Q8N328 593 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 CARNMT1Q8N4J0 409 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 KDM1BQ8NB78 822 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 C3orf20Q8ND61 904 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 HMGB4Q8WW32 186 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 PCDHB18PQ96TA0 734 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 TBCBQ99426 244 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 PRMT1Q99873 361 aaKnown RBP13.1□□□□□ -0.31
GGPS1-203ENST00000391855 TTYH3Q9C0H2 523 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 FBRSQ9HAH7 460 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 CD248Q9HCU0 757 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 METTL5Q9NRN9 209 aaKnown RBP13.1□□□□□ -0.31
GGPS1-203ENST00000391855 PIGVQ9NUD9 493 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 ARHGEF38Q9NXL2 777 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 KIAA1522Q9P206 1035 aaPredicted RBP13.1□□□□□ -0.31
GGPS1-203ENST00000391855 PLA2G4CQ9UP65 541 aa13.1□□□□□ -0.31
GGPS1-203ENST00000391855 PLXND1Q9Y4D7 1925 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 MYO18AQ92614 2054 aaKnown RBP13.09□□□□□ -0.31
GGPS1-203ENST00000391855 A0A1W2PQJ5 194 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 ANKRD62A6NC57 917 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 LRRC53A6NM62 1247 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 PAGE1O75459 146 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 DESP17661 470 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 GABRG2P18507 467 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 POLR2EP19388 210 aaKnown RBP13.09□□□□□ -0.31
GGPS1-203ENST00000391855 TNFAIP3P21580 790 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 SDC4P31431 198 aa13.09□□□□□ -0.31
GGPS1-203ENST00000391855 PRKCIP41743 596 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms