RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 FAM120CQ9NX05 1096 aaKnown RBP0.96□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PCDHGA9Q9Y5G4 932 aaKnown RBP0.96□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PCDHGA8Q9Y5G5 932 aa0.96□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PCDHGA7Q9Y5G6 932 aa0.96□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PCDHGA6Q9Y5G7 932 aa0.96□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PCDHGA3Q9Y5H0 932 aa0.96□□□□□ -2.26
RNU6-1239P-201ENST00000391310 CACNA1FO60840 1977 aa0.96□□□□□ -2.26
RNU6-1239P-201ENST00000391310 COL4A4P53420 1690 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 SAA2-SAA4A0A096LPE2 208 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 IGLV5-52A0A0A0MRZ9 124 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 FAM227AF5H4B4 570 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 KRTAP4-16G5E9R7 235 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 TPP1O14773 563 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 XPOTO43592 962 aaKnown RBP0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 SLC22A3O75751 556 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 CRYAAP02489 173 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 SLC3A2P08195 630 aaKnown RBP0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 FGF5P12034 268 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 CPEP16870 476 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 SP100P23497 879 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 ALDH4A1P30038 563 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 TIMP3P35625 211 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 ARFIP2P53365 341 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PMS2P54278 862 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 POLE2P56282 527 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 BNC1Q01954 994 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 NSUN2Q08J23 767 aaKnown RBP eCLIP0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 DMWDQ09019 674 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 GAB1Q13480 694 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 DUSP6Q16828 381 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 INSCQ1MX18 579 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 ACCSLQ4AC99 568 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PLEKHO1Q53GL0 409 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 RNF219Q5W0B1 726 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 GRHL2Q6ISB3 625 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 DHRS13Q6UX07 377 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 STXBP4Q6ZWJ1 553 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 CBARPQ8N350 705 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PRR18Q8N4B5 295 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 CELF5Q8N6W0 485 aaKnown RBP0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 ANKRD44Q8N8A2 993 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 C11orf44Q8N8P7 122 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PJA1Q8NG27 643 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 FAM76AQ8TAV0 307 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 WDR66Q8TBY9 1149 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 SORCS1Q8WY21 1168 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 UBXN4Q92575 508 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 ZNF501Q96CX3 271 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 MTFMTQ96DP5 389 aaKnown RBP0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 BICD1Q96G01 975 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 FAXDC2Q96IV6 333 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 FEM1CQ96JP0 617 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 ZNF668Q96K58 619 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 SAP30LQ9HAJ7 183 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 RPS10P5Q9NQ39 176 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PRR34Q9NV39 138 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 FNIP2Q9P278 1114 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 ATRXP46100 2492 aa0.95□□□□□ -2.26
RNU6-1239P-201ENST00000391310 LINC01553A4QN01 128 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 CLGNO14967 610 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 RRP9O43818 475 aaKnown RBP0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 DTNBO60941 627 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 SRSF10O75494 262 aaKnown RBP0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 SOX30O94993 753 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 TMEM225BP0DP42 221 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PDCP20941 246 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 IARSP41252 1262 aaKnown RBP0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 COPAP53621 1224 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 CTBP1Q13363 440 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PPIGQ13427 754 aaKnown RBP eCLIP0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 HNF4GQ14541 408 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 ANXA2RQ3ZCQ2 193 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 CACHD1Q5VU97 1274 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 ZDHHC20Q5W0Z9 365 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 RETSATQ6NUM9 610 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 SWSAP1Q6NVH7 229 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 USP17L6PQ6QN14 398 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PP632Q6XCG6 107 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 FOXL2NBQ6ZUU3 175 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 ZNF367Q7RTV3 350 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 KCTD20Q7Z5Y7 419 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 NOP9Q86U38 636 aaKnown RBP0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 HAPLN4Q86UW8 402 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 CAMK1DQ8IU85 385 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PAQR4Q8N4S7 273 aaPredicted RBP0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 MAB21L3Q8N8X9 362 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 KBTBD7Q8WVZ9 684 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 MRGPRX1Q96LB2 322 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 PPP1R9BQ96SB3 815 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 LITAFQ99732 161 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 SORBS1Q9BX66 1292 aaKnown RBP0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 TRIM2Q9C040 744 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 UBTD1Q9HAC8 227 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 ZNF334Q9HCZ1 680 aaPredicted RBP0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 IL36RNQ9UBH0 155 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 TP53TG3Q9ULZ0 132 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 SLC27A6Q9Y2P4 619 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 MRFAP1Q9Y605 127 aa0.94□□□□□ -2.26
RNU6-1239P-201ENST00000391310 RNF215Q9Y6U7 377 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms