RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 NTPCRQ9BSD7 190 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 KIFC3Q9BVG8 833 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 TMEM106CQ9BVX2 250 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 BTBD2Q9BX70 525 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 TEKT3Q9BXF9 490 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 TDRD1Q9BXT4 1180 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 ANKRD60Q9BZ19 345 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 RPF2Q9H7B2 306 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 SMYD3Q9H7B4 428 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 MRPL47Q9HD33 250 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PFDN4Q9NQP4 134 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 MAN1C1Q9NR34 630 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 VPS45Q9NRW7 570 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 C1orf112Q9NSG2 853 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PARVAQ9NVD7 372 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 RIC8BQ9NVN3 520 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PNPOQ9NVS9 261 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 TUBA8Q9NY65 449 aaPredicted RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 DDX56Q9NY93 547 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 NCKIPSDQ9NZQ3 722 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 SPATA7Q9P0W8 599 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 SLC17A6Q9P2U8 582 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PPP1R1BQ9UD71 204 aaPredicted RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 TJP2Q9UDY2 1190 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 FAM198AQ9UFP1 575 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 POLLQ9UGP5 575 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 EBF1Q9UH73 591 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 CYTH4Q9UIA0 394 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 XPO7Q9UIA9 1087 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 GNPTGQ9UJJ9 305 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 APPL1Q9UKG1 709 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 ITGB1BP2Q9UKP3 347 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PACSIN3Q9UKS6 424 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 SARDHQ9UL12 918 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PRR12Q9ULL5 1215 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 TBX20Q9UMR3 447 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 SYNPO2Q9UMS6 1093 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 PCDHGC3Q9UN70 934 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 USTQ9Y2C2 406 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 COQ6Q9Y2Z9 468 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 FAM32AQ9Y421 112 aaKnown RBP3.55□□□□□ -1.84
TRAV39-201ENST00000390466 NUB1Q9Y5A7 615 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 FADS3Q9Y5Q0 445 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 CORINQ9Y5Q5 1042 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 UBIAD1Q9Y5Z9 338 aa3.55□□□□□ -1.84
TRAV39-201ENST00000390466 NRCAMQ92823 1304 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 KLRG2A4D1S0 409 aaPredicted RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 DDTLA6NHG4 134 aaPredicted RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 TARM1B6A8C7 271 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 G3V2L1 256 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 H3BMQ9 156 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 PSMD12O00232 456 aaPredicted RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 TXNDC9O14530 226 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 ATP2A1O14983 1001 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 AQP9O43315 295 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 GRID2O43424 1007 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 HTRA2O43464 458 aaPredicted RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 KCNQ2O43526 872 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 AKAP10O43572 662 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 PLA2G6O60733 806 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 GLRA3O75311 464 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 AVILO75366 819 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 E2F6O75461 281 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 JRKO75564 520 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 DGKIO75912 1065 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 KRT37O76014 449 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 UFL1O94874 794 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 IL18RAPO95256 599 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 CCNE2O96020 404 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 ASS1P00966 412 aaKnown RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 IFNB1P01574 187 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 CALB1P05937 261 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 HSPA1AP0DMV8 641 aaKnown RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 HSPA1BP0DMV9 641 aaKnown RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 KITP10721 976 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 KRT5P13647 590 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 JUNBP17275 347 aaPredicted RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 TPSB2P20231 275 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 MYF6P23409 242 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 ATP2B4P23634 1241 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 IL4RP24394 825 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 ADSLP30566 484 aaPredicted RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 GNA15P30679 374 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 HOXA10P31260 410 aaPredicted RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 SSTR3P32745 418 aaPredicted RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 GNL1P36915 607 aaPredicted RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 PPARGP37231 505 aaPredicted RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 GJA8P48165 433 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 ARCN1P48444 511 aaKnown RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 SLC1A6P48664 564 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 SERPINB9P50453 376 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 BMXP51813 675 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 CDH15P55291 814 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 NLRP11P59045 1033 aaKnown RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 EIF3EP60228 445 aaKnown RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 NAA20P61599 178 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 GTF2IP78347 998 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 MRPS9P82933 396 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms