RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 FAM124AQ86V42 546 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 NLRP8Q86W28 1048 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 ECHDC2Q86YB7 292 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 DZIP1Q86YF9 867 aaKnown RBP1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 NRSN1Q8IZ57 195 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 STAG2Q8N3U4 1231 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 NME8Q8N427 588 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 D2HGDHQ8N465 521 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 CEP120Q8N960 986 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 MBD3L2Q8NHZ7 208 aaPredicted RBP1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 URGCPQ8TCY9 931 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 ZNF398Q8TD17 642 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 SH3RF2Q8TEC5 729 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 IPO4Q8TEX9 1081 aaKnown RBP1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 SEC14L1Q92503 715 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 FRZBQ92765 325 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 PTPRN2Q92932 1015 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 NAT6Q93015 286 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 BIRC7Q96CA5 298 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 MRGPRX1Q96LB2 322 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 SPATA33Q96N06 139 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 TRERF1Q96PN7 1200 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 TNFRSF13CQ96RJ3 184 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 FIZ1Q96SL8 496 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 SMAD5Q99717 465 aaKnown RBP1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 SLX1AQ9BQ83 275 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 SLF1Q9BQI6 1058 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 TMEM175Q9BSA9 504 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 YIPF4Q9BSR8 244 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 BHLHE41Q9C0J9 482 aaPredicted RBP1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 FAM49AQ9H0Q0 323 aaPredicted RBP1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 RBSNQ9H1K0 784 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 TNKS2Q9H2K2 1166 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 ZDHHC4Q9NPG8 344 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 RTN4Q9NQC3 1192 aaKnown RBP1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 HPS4Q9NQG7 708 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 ASAH2Q9NR71 780 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 CHST7Q9NS84 486 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 DDX28Q9NUL7 540 aaKnown RBP1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 DUS2Q9NX74 493 aaKnown RBP1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 MAP3K20Q9NYL2 800 aaKnown RBP1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 CYP39A1Q9NYL5 469 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 NLGN3Q9NZ94 848 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 KANSL3Q9P2N6 904 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 SLC17A7Q9P2U7 560 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 SLC9A2Q9UBY0 812 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 DNAJB4Q9UDY4 337 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 PILRAQ9UKJ1 303 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 HS3ST2Q9Y278 367 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 SLC27A5Q9Y2P5 690 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 PRG3Q9Y2Y8 225 aaPredicted RBP1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 PCDHGA3Q9Y5H0 932 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 MRPS18BQ9Y676 258 aaKnown RBP1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 HUWE1Q7Z6Z7 4374 aaKnown RBP1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 PDCD11Q14690 1871 aaKnown RBP1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 MCM3APO60318 1980 aa1.16□□□□□ -2.22
RNU6-42P-201ENST00000384165 ABCB11O95342 1321 aa1.15□□□□□ -2.22
RNU6-42P-201ENST00000384165 PDS5AQ29RF7 1337 aaKnown RBP1.15□□□□□ -2.22
RNU6-42P-201ENST00000384165 FAT2Q9NYQ8 4349 aa1.15□□□□□ -2.22
RNU6-42P-201ENST00000384165 USH2AO75445 5202 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 TBC1D3DA0A087WVF3 549 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 TBC1D3IA0A087WXS9 549 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 TBC1D3EA0A087X179 549 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 TBC1D3KA0A087X1G2 549 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 SSU72P8A0A1W2PR75 194 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 TBC1D3FA6NER0 549 aaPredicted RBP1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 TISP43B9A030 160 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 TBC1D3LB9A6J9 549 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 F8W810 466 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 CDC7O00311 574 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 MUSKO15146 869 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 TRAK2O60296 914 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 FAM20BO75063 409 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 PMPCBO75439 489 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 IPO13O94829 963 aaKnown RBP1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 DDHD2O94830 711 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 ZNF202O95125 648 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 PLAUP00749 431 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 KNG1P01042 644 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 ANXA1P04083 346 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 THP07101 528 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 LDHCP07864 332 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 CSF1P09603 554 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 ALOX5P09917 674 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 NUDT17P0C025 328 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 TBC1D3HP0C7X1 549 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 EPXP11678 715 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 UNGP13051 313 aaPredicted RBP1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 MYF6P23409 242 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 IGFBP5P24593 272 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 WEE1P30291 646 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 HOXC8P31273 242 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 CASP14P31944 242 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 MAN1A1P33908 653 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 OR1D2P34982 312 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 DRD3P35462 400 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 GARSP41250 739 aaKnown RBP1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 CCR2P41597 374 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 TPMTP51580 245 aa1.15□□□□□ -2.23
RNU6-42P-201ENST00000384165 THOP1P52888 689 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms