RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 CCNYQ8ND76 341 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 TFB1MQ8WVM0 346 aaKnown RBP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 ATP6V1G3Q96LB4 118 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 ZNF512Q96ME7 567 aaPredicted RBP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 QKIQ96PU8 341 aaKnown RBP eCLIP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 CEP41Q9BYV8 373 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 EPB41L4BQ9H329 900 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 PABPC3Q9H361 631 aaKnown RBP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 CDC42EP4Q9H3Q1 356 aaKnown RBP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 MRPL17Q9NRX2 175 aaKnown RBP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 SEPT10Q9P0V9 454 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 ZMYND8Q9ULU4 1186 aaPredicted RBP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 PLXNA4Q9HCM2 1894 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 TCRBV7S3A2A0A539 114 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 BCLAF3A2AJT9 711 aaKnown RBP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 LCHNA4D1U4 455 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 PRRG1O14668 218 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 TLR5O60602 858 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 SHBGP04278 402 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 VAV1P15498 845 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 TBX4P57082 545 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 IFFO1Q0D2I5 559 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 SLC29A2Q14542 456 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 BRMS1LQ5PSV4 323 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 SRLQ86TD4 932 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 CPT1BQ92523 772 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 PRCCQ92733 491 aaPredicted RBP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 FCRL2Q96LA5 508 aaPredicted RBP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 OLFM3Q96PB7 478 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 RBM15Q96T37 977 aaKnown RBP eCLIP11.28□□□□□ -0.6
FAM239A-201ENST00000381108 LRRC4CQ9HCJ2 640 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 MARCH2Q9P0N8 246 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 YIPF1Q9Y548 306 aa11.28□□□□□ -0.6
FAM239A-201ENST00000381108 TEX28O15482 410 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 TMEM63AO94886 807 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 ABLIM3O94929 683 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 ALDH1A3P47895 512 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 MORF4L2Q15014 288 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 TAF12Q16514 161 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 SKIDA1Q1XH10 827 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 KCTD16Q68DU8 428 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 MSANTD2Q6P1R3 559 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 ZCCHC9Q8N567 271 aaKnown RBP11.27□□□□□ -0.6
FAM239A-201ENST00000381108 KLHL23Q8NBE8 558 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 DEPDC1BQ8WUY9 529 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 CELF6Q96J87 481 aaKnown RBP11.27□□□□□ -0.6
FAM239A-201ENST00000381108 C9orf72Q96LT7 481 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 NACA2Q9H009 215 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 PRDM12Q9H4Q4 367 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 RAB6BQ9NRW1 208 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 CLIC5Q9NZA1 410 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 TLR6Q9Y2C9 796 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 FARP1Q9Y4F1 1045 aaPredicted RBP11.27□□□□□ -0.6
FAM239A-201ENST00000381108 INSL6Q9Y581 213 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 HS3ST4Q9Y661 456 aa11.27□□□□□ -0.6
FAM239A-201ENST00000381108 SHROOM3Q8TF72 1996 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 TRANK1O15050 2925 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 NUP205Q92621 2012 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 CEP290O15078 2479 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 SLC12A8A0AV02 714 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 CFAP69A5D8W1 941 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 SMIM23A6NLE4 172 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 H0YGN5 161 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 EBAG9O00559 213 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 RIPK2O43353 540 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 TLL1O43897 1013 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 BANF1O75531 89 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 LINC00271P0C7V0 271 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 HTRA4P83105 476 aaPredicted RBP11.27□□□□□ -0.61
FAM239A-201ENST00000381108 ZNF844Q08AG5 666 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 TWF1Q12792 350 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 PLD1Q13393 1074 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 XRCC4Q13426 336 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 PPP2R5DQ14738 602 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 FASTKD3Q14CZ7 662 aaKnown RBP11.27□□□□□ -0.61
FAM239A-201ENST00000381108 PAFAH1B3Q15102 231 aaKnown RBP11.27□□□□□ -0.61
FAM239A-201ENST00000381108 TTMPQ5BVD1 217 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 PSRC1Q6PGN9 363 aaPredicted RBP11.27□□□□□ -0.61
FAM239A-201ENST00000381108 BZW1Q7L1Q6 419 aaKnown RBP11.27□□□□□ -0.61
FAM239A-201ENST00000381108 PPIL6Q8IXY8 311 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 HTR3CQ8WXA8 447 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 ARL8AQ96BM9 186 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 HAPLN3Q96S86 360 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 SAYSD1Q9NPB0 183 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 PAK5Q9P286 719 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 SHOC2Q9UQ13 582 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 NEU3Q9UQ49 428 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 RRP15Q9Y3B9 282 aaKnown RBP11.27□□□□□ -0.61
FAM239A-201ENST00000381108 NFS1Q9Y697 457 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 SLC4A7Q9Y6M7 1214 aa11.27□□□□□ -0.61
FAM239A-201ENST00000381108 MYO18AQ92614 2054 aaKnown RBP11.26□□□□□ -0.61
FAM239A-201ENST00000381108 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.26□□□□□ -0.61
FAM239A-201ENST00000381108 KCNU1A8MYU2 1149 aa11.26□□□□□ -0.61
FAM239A-201ENST00000381108 KCNK1O00180 336 aa11.26□□□□□ -0.61
FAM239A-201ENST00000381108 PPP1R12AO14974 1030 aaPredicted RBP11.26□□□□□ -0.61
FAM239A-201ENST00000381108 APOEP02649 317 aa11.26□□□□□ -0.61
FAM239A-201ENST00000381108 ATP2A2P16615 1042 aaKnown RBP11.26□□□□□ -0.61
FAM239A-201ENST00000381108 NR1D1P20393 614 aa11.26□□□□□ -0.61
FAM239A-201ENST00000381108 ELF1P32519 619 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms