RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 SCAMP5Q8TAC9 235 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 ITFG2Q969R8 447 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 B3GALT6Q96L58 329 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 APBA2Q99767 749 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 TSPYL2Q9H2G4 693 aaPredicted RBP11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 DENND2DQ9H6A0 471 aaPredicted RBP11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 GGA2Q9UJY4 613 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 ABT1Q9ULW3 272 aaKnown RBP11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 NME7Q9Y5B8 376 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 NUP205Q92621 2012 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 CCDC189A1A4V9 331 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 F8W810 466 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 SPECC1L-ADORA2AF8WAN1 911 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 NDC80O14777 642 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 TYROBPO43914 113 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 MGRN1O60291 552 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 TSPAN8P19075 237 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 IL4RP24394 825 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 SERPINB5P36952 375 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 CUL3Q13618 768 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 ZNF460Q14592 562 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 SV2CQ496J9 727 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 RGS9BPQ6ZS82 235 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 UBR7Q8N806 425 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 SNX31Q8N9S9 440 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 SLC35F5Q8WV83 523 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 SPDL1Q96EA4 605 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 OXNAD1Q96HP4 312 aaPredicted RBP11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 PARK7Q99497 189 aaKnown RBP11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 ARHGEF4Q9NR80 690 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 CHRAC1Q9NRG0 131 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 PIGVQ9NUD9 493 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 MPP6Q9NZW5 540 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 SRRM3A6NNA2 597 aaPredicted RBP11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 VAV1P15498 845 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 GCKP35557 465 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 MAXP61244 160 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 USP10Q14694 798 aaKnown RBP11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 MARCH8Q5T0T0 291 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 NIPA2Q8N8Q9 360 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 FNIP1Q8TF40 1166 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 C10orf82Q8WW14 230 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 EBNA1BP2Q99848 306 aaKnown RBP11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 FSD1LQ9BXM9 530 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 ST3GAL5Q9UNP4 418 aa11.25□□□□□ -0.61
DNMT3A-203ENST00000380746 ZNFX1Q9P2E3 1918 aaKnown RBP11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 PRR5-ARHGAP8B1AHC4 643 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 MDM4O15151 490 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 CCDC22O60826 627 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 USP1O94782 785 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 MT-CYBP00156 380 aaPredicted RBP11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 THP07101 528 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 ARHGAP8P85298 464 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 ZRSR2Q15696 482 aaKnown RBP11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 PDCD2Q16342 344 aaPredicted RBP11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 TSNAXIP1Q2TAA8 658 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 ARL13BQ3SXY8 428 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 KHDC1Q4VXA5 237 aaKnown RBP11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 TCHHL1Q5QJ38 904 aaPredicted RBP11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 RNF43Q68DV7 783 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 ALKBH8Q96BT7 664 aaKnown RBP11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 SNX27Q96L92 541 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 XPNPEP3Q9NQH7 507 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 GJD2Q9UKL4 321 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 CDY2AQ9Y6F7 541 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 TEX264Q9Y6I9 313 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 DNAJC25-GNG10A0A024R161 153 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 RRN3P2A6NIE6 340 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 C9IYK1 514 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 ITM2AO43736 263 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 GABBR2O75899 941 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 POLBP06746 335 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 PIRTP0C851 137 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 UBTFL6P0CB48 400 aaPredicted RBP11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 NPR3P17342 541 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 CCND1P24385 295 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 CD52P31358 61 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 CCR10P46092 362 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 GJA9P57773 515 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 CTBP1Q13363 440 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 STILQ15468 1287 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 DRICH1Q6PGQ1 229 aaPredicted RBP11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 C10orf107Q8IVU9 208 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 AGGF1Q8N302 714 aaeCLIP11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 TEX9Q8N6V9 391 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 FBXO27Q8NI29 283 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 PDCD6IPQ8WUM4 868 aaKnown RBP11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 CHST12Q9NRB3 414 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 GTSE1Q9NYZ3 720 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 KIAA1257Q9ULG3 409 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 SSC5DA1L4H1 1573 aa11.24□□□□□ -0.61
DNMT3A-203ENST00000380746 CCDC160A6NGH7 325 aa11.23□□□□□ -0.61
DNMT3A-203ENST00000380746 ENO4A6NNW6 628 aa11.23□□□□□ -0.61
DNMT3A-203ENST00000380746 CHADO15335 359 aa11.23□□□□□ -0.61
DNMT3A-203ENST00000380746 ZBTB24O43167 697 aaPredicted RBP11.23□□□□□ -0.61
DNMT3A-203ENST00000380746 PRPF4O43172 522 aaKnown RBP eCLIP11.23□□□□□ -0.611e-6■■■■□ 22
DNMT3A-203ENST00000380746 DCXO43602 365 aa11.23□□□□□ -0.61
DNMT3A-203ENST00000380746 ENDOD1O94919 500 aa11.23□□□□□ -0.61
DNMT3A-203ENST00000380746 NFKB1P19838 968 aa11.23□□□□□ -0.61
DNMT3A-203ENST00000380746 PDK1Q15118 436 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms