RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 RIPK3Q9Y572 518 aa6.76□□□□□ -1.33
RIPK1-202ENST00000380409 ATRNL1Q5VV63 1379 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 PNMA6FA0A0J9YX94 578 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 SNTNA6NMZ2 147 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 H0YIN7 160 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 TXNDC9O14530 226 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 ZW10O43264 779 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 MYL2P10916 166 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 GPD2P43304 727 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 SMARCB1Q12824 385 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 ZNF211Q13398 564 aaPredicted RBP6.75□□□□□ -1.33
RIPK1-202ENST00000380409 SIM2Q14190 667 aaPredicted RBP6.75□□□□□ -1.33
RIPK1-202ENST00000380409 ABCB5Q2M3G0 1257 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 OTOP3Q7RTS5 596 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 CCDC105Q8IYK2 499 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 CLIP4Q8N3C7 705 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 MFSD4AQ8N468 514 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 SLC4A11Q8NBS3 891 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 GALNT11Q8NCW6 608 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 TTLQ8NG68 377 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 ZFPM2Q8WW38 1151 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 HERVK_113Q902F9 699 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 CEP95Q96GE4 821 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 RMDN3Q96TC7 470 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 KLHL25Q9H0H3 589 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 MANSC1Q9H8J5 431 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 CHST12Q9NRB3 414 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 RNF181Q9P0P0 153 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 UBA2Q9UBT2 640 aaPredicted RBP6.75□□□□□ -1.33
RIPK1-202ENST00000380409 SERPINB13Q9UIV8 391 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 SORCS3Q9UPU3 1222 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 CNTNAP5Q8WYK1 1306 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 ITGB4P16144 1822 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 A0A0X1KG70 313 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 A0A1W2PPM1 405 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 TCRBV5S4A2TA0A5A2 114 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 ERVV-1B6SEH8 477 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 TDP2O95551 362 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 GOT2P00505 430 aaKnown RBP6.75□□□□□ -1.33
RIPK1-202ENST00000380409 ENO1P06733 434 aaKnown RBP6.75□□□□□ -1.33
RIPK1-202ENST00000380409 SERPINA6P08185 405 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 STAT1P42224 750 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 CASP5P51878 434 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 GALCP54803 685 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 FAM122CQ6P4D5 195 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 PLEKHG7Q6ZR37 379 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 SYDE1Q6ZW31 735 aaPredicted RBP6.75□□□□□ -1.33
RIPK1-202ENST00000380409 SLC2A14Q8TDB8 520 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 SNX18Q96RF0 628 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 CDK5RAP1Q96SZ6 601 aaKnown RBP6.75□□□□□ -1.33
RIPK1-202ENST00000380409 DCUN1D5Q9BTE7 237 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 MXD3Q9BW11 206 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 TSSK1BQ9BXA7 367 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 C1QTNF7Q9BXJ2 289 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 MRPL9Q9BYD2 267 aaKnown RBP6.75□□□□□ -1.33
RIPK1-202ENST00000380409 GCOM2Q9BZD3 368 aaPredicted RBP6.75□□□□□ -1.33
RIPK1-202ENST00000380409 GPN2Q9H9Y4 310 aaPredicted RBP6.75□□□□□ -1.33
RIPK1-202ENST00000380409 PPCSQ9HAB8 311 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 PNPLA3Q9NST1 481 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 ITGA11Q9UKX5 1188 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 VANGL2Q9ULK5 521 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 RIC1Q4ADV7 1423 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 EML1O00423 815 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 GABBR2O75899 941 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 RAD17O75943 681 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 OLFM2O95897 454 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 IFNB1P01574 187 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 CSTF2P33240 577 aaKnown RBP eCLIP6.75□□□□□ -1.33
RIPK1-202ENST00000380409 ERFP50548 548 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 RALGPS1Q5JS13 557 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 FAM205BPQ63HN1 556 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 FBXO11Q86XK2 927 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 FAM178BQ8IXR5 827 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 ELMOD2Q8IZ81 293 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 ARHGEF26Q96DR7 871 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 BTBD2Q9BX70 525 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 GPR88Q9GZN0 384 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 DNAJC18Q9H819 358 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 SLC8A2Q9UPR5 921 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 PTPN22Q9Y2R2 807 aa6.75□□□□□ -1.33
RIPK1-202ENST00000380409 PAPPAQ13219 1627 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 CENPFP49454 3210 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 CLPXO76031 633 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 H2AFZP0C0S5 128 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 GARTP22102 1010 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 ITGA8P53708 1063 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 PHC1P78364 1004 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 HTRA3P83110 453 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 COX10Q12887 443 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 EFHC2Q5JST6 749 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 PPM1LQ5SGD2 360 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 ODR4Q5SWX8 454 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 TTBK2Q6IQ55 1244 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 MAMDC4Q6UXC1 1216 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 UNC5AQ6ZN44 842 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 H2AFVQ71UI9 128 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 RIOX2Q8IUF8 465 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 CCDC28AQ8IWP9 274 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 FBXW8Q8N3Y1 598 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 CAPSLQ8WWF8 208 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms