RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 TTC39BQ5VTQ0 682 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 DSTYKQ6XUX3 929 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 CCNYQ8ND76 341 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 RFWD2Q8NHY2 731 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 HASPINQ8TF76 798 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 SOCS4Q8WXH5 440 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 EDEM1Q92611 657 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 TTC17Q96AE7 1141 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 ALKBH8Q96BT7 664 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 ERP27Q96DN0 273 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 APOPT1Q96IL0 206 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 FAM161BQ96MY7 647 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 SPATA13Q96N96 652 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 RTP3Q9BQQ7 232 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 MANSC1Q9H8J5 431 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 KANSL3Q9P2N6 904 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 SNX10Q9Y5X0 201 aa8.21□□□□□ -1.1
PDLIM5-204ENST00000380176 WDR27A2RRH5 827 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 HHLA1C9JL84 531 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 F8W810 466 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 KCNK1O00180 336 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 EEF2KO00418 725 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 TRDMT1O14717 391 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 CAPN9O14815 690 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 RFPL1O75677 317 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 TOP3BO95985 862 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 POMCP01189 267 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 CYBAP13498 195 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 NCAM1P13591 858 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 PSMB4P28070 264 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 CD52P31358 61 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 ADRA1BP35368 520 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 DPYSQ14117 519 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 UPP1Q16831 310 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 TMEM92Q6UXU6 159 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 EP400NLQ6ZTU2 488 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 RFX8Q6ZV50 586 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 BHLHA9Q7RTU4 235 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 SUGP1Q8IWZ8 645 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 GSDMBQ8TAX9 411 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 SRPK1Q96SB4 655 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 VPS11Q9H270 941 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 IL1RAPL1Q9NZN1 696 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 DCTN4Q9UJW0 460 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 STAP1Q9ULZ2 295 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 BPTFQ12830 3046 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 FAM159BA6NKW6 160 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 H3BRJ5 948 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 DCLK1O15075 740 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 KRT16P08779 473 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 SNRPAP09012 282 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 NQO1P15559 274 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 BGNP21810 368 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 CALRP27797 417 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 BRCC3P46736 316 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 LHX1P48742 406 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 SESN2P58004 480 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 CAP1Q01518 475 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 MGAT3Q09327 533 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 RAB41Q5JT25 222 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 MROH9Q5TGP6 573 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 BSPRYQ5W0U4 402 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 RGMBQ6NW40 437 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 C4orf22Q6V702 233 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 ASRGL1Q7L266 308 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 SERINC5Q86VE9 423 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 ZNF567Q8N184 647 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 GBP7Q8N8V2 638 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 ARNTL2Q8WYA1 636 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 KLHL29Q96CT2 875 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 LRRC39Q96DD0 335 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 FAM210AQ96ND0 272 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 TMEM209Q96SK2 561 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 MECRQ9BV79 373 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 SLC13A1Q9BZW2 595 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 DNAI2Q9GZS0 605 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 ZFYVE28Q9HCC9 887 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 SLC38A7Q9NVC3 462 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 RCOR3Q9P2K3 495 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 PADI3Q9ULW8 664 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 PCDHA11Q9Y5I1 949 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 USH1CQ9Y6N9 552 aa8.2□□□□□ -1.1
PDLIM5-204ENST00000380176 A8MUI8 341 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 HACD1B0YJ81 288 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 ALADP13716 330 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 ERCC2P18074 760 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 NDUFV2P19404 249 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 MNAT1P51948 309 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 CCDC15Q0P6D6 951 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 PAFAH1B3Q15102 231 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 CES4AQ5XG92 561 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 PSTKQ8IV42 348 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 NPWQ8N729 165 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 DEPDC1BQ8WUY9 529 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 LRRC37BQ96QE4 947 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 GORASP1Q9BQQ3 440 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 TMLHEQ9NVH6 421 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 MOCS1Q9NZB8 636 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 ZNF180Q9UJW8 692 aa8.19□□□□□ -1.1
PDLIM5-204ENST00000380176 PTPRDP23468 1912 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms