RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 NOSIPQ9Y314 301 aaKnown RBP7.69□□□□□ -1.18
CDKL5-201ENST00000379989 COL4A3BPQ9Y5P4 624 aa7.69□□□□□ -1.18
CDKL5-201ENST00000379989 POC1B-GALNT4F8VUJ3 575 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 PDXKO00764 312 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 CALUO43852 315 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 PPP1R11O60927 126 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 GH2P01242 217 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 PTGER2P43116 358 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 MLLT10P55197 1068 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 GALK2Q01415 458 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 SIX1Q15475 284 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 TCHHL1Q5QJ38 904 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 SLX4IPQ5VYV7 408 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 DPY19L2P1Q6NXN4 242 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 IDO2Q6ZQW0 420 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 HERVK_113Q902F9 699 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 SLC5A5Q92911 643 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 ACDQ96AP0 544 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 METTL2AQ96IZ6 378 aaKnown RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 GCOM2Q9BZD3 368 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 VAT1LQ9HCJ6 419 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 OLAHQ9NV23 265 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 SENP1Q9P0U3 644 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 LOC285556D6RIA3 1793 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 GOLGA8JA6NMD2 632 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 GPC4O75487 556 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 ERBB2P04626 1255 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 ZNF182P17025 639 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 ITIH2P19823 946 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 EIF6P56537 245 aaKnown RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 KRT17Q04695 432 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 EN1Q05925 392 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 DNASE1L3Q13609 305 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 GNA13Q14344 377 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 PRKD1Q15139 912 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 FAM26FQ5R3K3 315 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 FRMD5Q7Z6J6 570 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 CCDC89Q8N998 374 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 NLRP7Q8WX94 980 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 FRMD8Q9BZ67 464 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 NAA50Q9GZZ1 169 aaKnown RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 AVENQ9NQS1 362 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 THG1LQ9NWX6 298 aaKnown RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 CDH22Q9UJ99 828 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 MYRFQ9Y2G1 1151 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 NCANO14594 1321 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 BAZ2BQ9UIF8 2168 aaKnown RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 ARPC4-TTLL3A0A0A6YYG9 625 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 SNPHO15079 494 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 ACTN1P12814 892 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 KRT10P13645 584 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 VEGFAP15692 232 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 DPEP1P16444 411 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 CHRNA5P30532 468 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 HSPA13P48723 471 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 COPZ1P61923 177 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 ESRRGP62508 458 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 PRKCQQ04759 706 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 ADGRE1Q14246 886 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 NDUFAF5Q5TEU4 345 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 PXDC1Q5TGL8 231 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 FAM205BPQ63HN1 556 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 CYP4F22Q6NT55 531 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 DGLUCYQ7Z3D6 616 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 AKAP14Q86UN6 197 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 TDRPQ86YL5 185 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 HPS6Q86YV9 775 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 EFCAB3Q8N7B9 438 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 MINDY2Q8NBR6 621 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 RFFLQ8WZ73 363 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 NACC1Q96RE7 527 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 ZNF341Q9BYN7 854 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 RSPH9Q9H1X1 276 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-201ENST00000379989 MYOZ2Q9NPC6 264 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 ACP6Q9NPH0 428 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 TBC1D22BQ9NU19 505 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 SLC17A7Q9P2U7 560 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 ASIC3Q9UHC3 531 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 RIMS3Q9UJD0 308 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 VANGL2Q9ULK5 521 aa7.68□□□□□ -1.18
CDKL5-201ENST00000379989 SNAP91O60641 907 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 CAPN1P07384 714 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 ICAM2P13598 275 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 RPL17P18621 184 aaKnown RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 EIF2AK2P19525 551 aaKnown RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 DCKP27707 260 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 SFNP31947 248 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 TXNL4AP83876 142 aaKnown RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 ECT2LQ008S8 904 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 IFITM3Q01628 133 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 C1QBPQ07021 282 aaKnown RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 CARTPTQ16568 116 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 IGSF11Q5DX21 431 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 GPR107Q5VW38 600 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 LYPD8Q6UX82 237 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 TMEM26Q6ZUK4 368 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 CAND1Q86VP6 1230 aaKnown RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 SNX29P2Q8IUI4 249 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 SAMD14Q8IZD0 417 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 ASCC1Q8N9N2 400 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms