RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 TBC1D20Q96BZ9 403 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 PPP1R10Q96QC0 940 aaKnown RBP11.15□□□□□ -0.62
NEDD9-201ENST00000379433 DUSP16Q9BY84 665 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 SENP6Q9GZR1 1112 aaPredicted RBP11.15□□□□□ -0.62
NEDD9-201ENST00000379433 NRDE2Q9H7Z3 1164 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 TMLHEQ9NVH6 421 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 SLC17A6Q9P2U8 582 aa11.15□□□□□ -0.62
NEDD9-201ENST00000379433 SHOX2O60902 331 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-201ENST00000379433 HMBSP08397 361 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 GJA9P57773 515 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 LPIN1Q14693 890 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 TAF11Q15544 211 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 DEFB115Q30KQ5 88 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 MAP7D1Q3KQU3 841 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 SYDE1Q6ZW31 735 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-201ENST00000379433 FAM35AQ86V20 835 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 UNC93AQ86WB7 457 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 PPIL6Q8IXY8 311 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 TTC13Q8NBP0 860 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 BBOF1Q8ND07 529 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 SPDYE1Q8NFV5 336 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-201ENST00000379433 MYLPFQ96A32 169 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 ETNK1Q9HBU6 452 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 KBTBD13C9JR72 458 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 C2CD2LO14523 706 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 FOXD2O60548 495 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-201ENST00000379433 PQBP1O60828 265 aaKnown RBP11.14□□□□□ -0.63
NEDD9-201ENST00000379433 STILQ15468 1287 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 PKDCCQ504Y2 493 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 HEATR6Q6AI08 1181 aaKnown RBP11.14□□□□□ -0.63
NEDD9-201ENST00000379433 ARHGEF18Q6ZSZ5 1173 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 SERINC5Q86VE9 423 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 CSPG4P5Q96PW8 444 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 SMOQ99835 787 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 NKIRAS1Q9NYS0 192 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 DNAJB4Q9UDY4 337 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 B4GALT3O60512 393 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 SLC34A2O95436 690 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 METTL18O95568 372 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 AGTP01019 485 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 KCNE1P15382 129 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 KRT4P19013 534 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 L1CAMP32004 1257 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 PCK1P35558 622 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 CCL23P55773 120 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 MRPS5P82675 430 aaKnown RBP11.14□□□□□ -0.63
NEDD9-201ENST00000379433 ZBTB17Q13105 803 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 BMPR2Q13873 1038 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 DDR2Q16832 855 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 KRT77Q7Z794 578 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 DEFB128Q7Z7B8 93 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 RNF180Q86T96 592 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 LRRTM3Q86VH5 581 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 NKD2Q969F2 451 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-201ENST00000379433 STARD7Q9NQZ5 370 aa11.14□□□□□ -0.63
NEDD9-201ENST00000379433 A0A087WUV0 522 aaPredicted RBP11.13□□□□□ -0.63
NEDD9-201ENST00000379433 MFSD11O43934 449 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 GRK4P32298 578 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 ABCG1P45844 678 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 GPR15P49685 360 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 ACLYP53396 1101 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 LBRQ14739 615 aaKnown RBP11.13□□□□□ -0.63
NEDD9-201ENST00000379433 FAM133BQ5BKY9 247 aaKnown RBP11.13□□□□□ -0.63
NEDD9-201ENST00000379433 OVOS1Q6IE37 1185 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 MPP5Q8N3R9 675 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 SLCO2A1Q92959 643 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 TLCD1Q96CP7 247 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 FAM193BQ96PV7 902 aaPredicted RBP11.13□□□□□ -0.63
NEDD9-201ENST00000379433 PPP1R12CQ9BZL4 782 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 SLC13A1Q9BZW2 595 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 DDX20Q9UHI6 824 aaKnown RBP11.13□□□□□ -0.63
NEDD9-201ENST00000379433 ADAMTS4O75173 837 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 CDH16O75309 829 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 SKAP2O75563 359 aaPredicted RBP11.13□□□□□ -0.63
NEDD9-201ENST00000379433 MATKP42679 507 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 PGFP49763 221 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 CSE1LP55060 971 aaKnown RBP11.13□□□□□ -0.63
NEDD9-201ENST00000379433 GPX6P59796 221 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 CAV1Q03135 178 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 DNAJC3Q13217 504 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 MORF4L2Q15014 288 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 RASA2Q15283 850 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 SLC39A12Q504Y0 691 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 CAPRIN2Q6IMN6 1127 aaKnown RBP11.13□□□□□ -0.63
NEDD9-201ENST00000379433 BTN2A1Q7KYR7 527 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 TMCO2Q7Z6W1 182 aaPredicted RBP11.13□□□□□ -0.63
NEDD9-201ENST00000379433 CRYBG2Q8N1P7 616 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 PDCD7Q8N8D1 485 aaKnown RBP11.13□□□□□ -0.63
NEDD9-201ENST00000379433 CHMP6Q96FZ7 201 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 SCLYQ96I15 445 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 ANLNQ9NQW6 1124 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 SLC27A5Q9Y2P5 690 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 DERAQ9Y315 318 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 SIP14410 1827 aa11.13□□□□□ -0.63
NEDD9-201ENST00000379433 GOLGA8TH3BQL2 631 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 MDM4O15151 490 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 TRAPPC3O43617 180 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 UGT1A9O60656 530 aa11.12□□□□□ -0.63
NEDD9-201ENST00000379433 RTN3O95197 1032 aaPredicted RBP11.12□□□□□ -0.63
NEDD9-201ENST00000379433 EPHB2P29323 1055 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms