RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 EPHB1P54762 984 aa16.71■□□□□ 0.26
TRIM27-202ENST00000377199 IFRD2Q12894 506 aaPredicted RBP16.71■□□□□ 0.26
TRIM27-202ENST00000377199 SNAPC2Q13487 334 aa16.71■□□□□ 0.26
TRIM27-202ENST00000377199 DGKDQ16760 1214 aa16.71■□□□□ 0.26
TRIM27-202ENST00000377199 LRRC36Q1X8D7 754 aa16.71■□□□□ 0.26
TRIM27-202ENST00000377199 FAM72AQ5TYM5 149 aa16.71■□□□□ 0.26
TRIM27-202ENST00000377199 FAM72DQ6L9T8 149 aa16.71■□□□□ 0.26
TRIM27-202ENST00000377199 FAM72BQ86X60 149 aa16.71■□□□□ 0.26
TRIM27-202ENST00000377199 ZNF567Q8N184 647 aa16.71■□□□□ 0.26
TRIM27-202ENST00000377199 MAN1C1Q9NR34 630 aa16.71■□□□□ 0.26
TRIM27-202ENST00000377199 KLF11O14901 512 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 USP1O94782 785 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 ITGA2BP08514 1039 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 C6orf222P0C671 652 aaPredicted RBP16.7■□□□□ 0.26
TRIM27-202ENST00000377199 TPH1P17752 444 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 TPSB2P20231 275 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 CCNFP41002 786 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 MATKP42679 507 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 SLC1A6P48664 564 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 NR2C2P49116 596 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 TUBP50607 506 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 TPSAB1Q15661 275 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 C1orf146Q5VVC0 180 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 LMNTD2Q8IXW0 634 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 BATF3Q9NR55 127 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 DONSONQ9NYP3 566 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 EMCNQ9ULC0 261 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 G3BP2Q9UN86 482 aaKnown RBP16.7■□□□□ 0.26
TRIM27-202ENST00000377199 LRRC42Q9Y546 428 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 BPTFQ12830 3046 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 STK10O94804 968 aaKnown RBP16.7■□□□□ 0.26
TRIM27-202ENST00000377199 SORBS2O94875 1100 aaKnown RBP16.7■□□□□ 0.26
TRIM27-202ENST00000377199 ATP6V1C1P21283 382 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 DEUP1Q05D60 604 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 ITGA9Q13797 1035 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 DLG2Q15700 870 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 ATG14Q6ZNE5 492 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 LRRC74BQ6ZQY2 392 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 WDR75Q8IWA0 830 aaKnown RBP16.7■□□□□ 0.26
TRIM27-202ENST00000377199 SIX6OS1Q8N1H7 587 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 ATP2A3Q93084 1043 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 ZNF669Q96BR6 464 aaPredicted RBP16.7■□□□□ 0.26
TRIM27-202ENST00000377199 AGAP2Q99490 1192 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 OXCT2Q9BYC2 517 aaPredicted RBP16.7■□□□□ 0.26
TRIM27-202ENST00000377199 ADAMTS10Q9H324 1103 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 VTA1Q9NP79 307 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 PIGVQ9NUD9 493 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 MOCS1Q9NZB8 636 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 TMEM216Q9P0N5 145 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 FZD10Q9ULW2 581 aa16.7■□□□□ 0.26
TRIM27-202ENST00000377199 UBQLN1Q9UMX0 589 aaKnown RBP16.7■□□□□ 0.26
TRIM27-202ENST00000377199 SMNDC1O75940 238 aaKnown RBP eCLIP16.69■□□□□ 0.261e-12■■■■■ 29.6
TRIM27-202ENST00000377199 LUC7L3O95232 432 aaKnown RBP16.69■□□□□ 0.26
TRIM27-202ENST00000377199 VHLP40337 213 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 CCNA1P78396 465 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 KRT72Q14CN4 511 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 OSTM1Q86WC4 334 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 NT5DC4Q86YG4 428 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 ZDHHC17Q8IUH5 632 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 SCUBE1Q8IWY4 988 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 RNF169Q8NCN4 708 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 B3GALNT2Q8NCR0 500 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 ZNF778Q96MU6 729 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 THAP1Q9NVV9 213 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 CPSF2Q9P2I0 782 aaKnown RBP16.69■□□□□ 0.26
TRIM27-202ENST00000377199 EEF2KO00418 725 aaKnown RBP16.69■□□□□ 0.26
TRIM27-202ENST00000377199 STAU1O95793 577 aaKnown RBP16.69■□□□□ 0.26
TRIM27-202ENST00000377199 LMNAP02545 664 aaKnown RBP16.69■□□□□ 0.26
TRIM27-202ENST00000377199 MAGEA6P43360 314 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 SERPINB9P50453 376 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 CCNG1P51959 295 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 BLMHQ13867 455 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 WSCD1Q658N2 575 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 RIPOR1Q6ZS17 1223 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 UNC93AQ86WB7 457 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 LRRC52Q8N7C0 313 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 ARNTL2Q8WYA1 636 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 UNKQ9C0B0 810 aaKnown RBP16.69■□□□□ 0.26
TRIM27-202ENST00000377199 TAGLN3Q9UI15 199 aa16.69■□□□□ 0.26
TRIM27-202ENST00000377199 MEIS3P2A8K0S8 358 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 CAPN14A8MX76 684 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 PDE5AO76074 875 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 AMHP03971 560 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 SMIM10L2AP0DMW4 78 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 SMIM10L2BP0DMW5 78 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 TAF6P49848 677 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 SLC34A1Q06495 639 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 USP4Q13107 963 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 ZBTB6Q15916 424 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 SPDYAQ5MJ70 313 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 ARHGAP17Q68EM7 881 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 TMEM154Q6P9G4 183 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 ZNF410Q86VK4 478 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 TMPRSS6Q8IU80 811 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 ULK2Q8IYT8 1036 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.68■□□□□ 0.26
TRIM27-202ENST00000377199 GSTCDQ8NEC7 633 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 PIWIL2Q8TC59 973 aaKnown RBP16.68■□□□□ 0.26
TRIM27-202ENST00000377199 EDEM1Q92611 657 aa16.68■□□□□ 0.26
TRIM27-202ENST00000377199 CENPIQ92674 756 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms