RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 POM121L1PQ3SYA9 428 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 PTF1AQ7RTS3 328 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 KCNK18Q7Z418 384 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 RBM23Q86U06 439 aaKnown RBP13.93□□□□□ -0.18
GPC6-201ENST00000377047 SPATA20Q8TB22 786 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 CXorf40AQ8TE69 158 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 CAAP1Q9H8G2 361 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 AHSPQ9NZD4 102 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 NCKIPSDQ9NZQ3 722 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 SEPT3Q9UH03 358 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 TMCC3Q9ULS5 477 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 ST3GAL5Q9UNP4 418 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 SERPINI2O75830 405 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 RARGP13631 454 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 TCEA2Q15560 299 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 WLSQ5T9L3 541 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 CYP4Z1Q86W10 505 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 VCPIP1Q96JH7 1222 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 GANQ9H2C0 597 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 ALBP02768 609 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 RPN2P04844 631 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 THRAP10827 490 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 HDCP19113 662 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 LRRC34Q8IZ02 419 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 KRT84Q9NSB2 600 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 SLC27A5Q9Y2P5 690 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 MAFO75444 373 aaPredicted RBP13.92□□□□□ -0.18
GPC6-201ENST00000377047 PSMD10O75832 226 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 ZNF682O95780 498 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 APOA1P02647 267 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 PGAM1P18669 254 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 NPY2RP49146 381 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 FKBP1BP68106 108 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 DLG4P78352 724 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 USP41Q3LFD5 358 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 ZNF470Q6ECI4 717 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 CCDC81Q6ZN84 652 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 TRAPPC5Q8IUR0 188 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 DENND1CQ8IV53 801 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 BLOC1S4Q9NUP1 217 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 SH3BP4Q9P0V3 963 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 ZNF229Q9UJW7 825 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 TNFSF13BQ9Y275 285 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 TM4SF1P30408 202 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 FMO4P31512 558 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 TRIM60Q495X7 471 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 SPANXN3Q5MJ09 141 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 GRTP1Q5TC63 336 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 WDR18Q9BV38 432 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 PRKD2Q9BZL6 878 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 GSTM1P09488 218 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 SLURP2P0DP57 97 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 FLT3LGP49771 235 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 NDUFV1P49821 464 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 LRRC23Q53EV4 343 aaPredicted RBP13.92□□□□□ -0.18
GPC6-201ENST00000377047 SLC35C1Q96A29 364 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 LENG9Q96B70 501 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 MAGEB18Q96M61 343 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 POLR1EQ9GZS1 481 aaKnown RBP13.92□□□□□ -0.18
GPC6-201ENST00000377047 LACRTQ9GZZ8 138 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 SOX13Q9UN79 622 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 UBIAD1Q9Y5Z9 338 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 RASSF10A6NK89 507 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 VAPBO95292 243 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 MT-CO1P00395 513 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 TYMPP19971 482 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 S100A5P33763 92 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 CYLC2Q14093 348 aaPredicted RBP13.92□□□□□ -0.18
GPC6-201ENST00000377047 C1orf186Q6ZWK4 172 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 RIN3Q8TB24 985 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 AGXT2Q9BYV1 514 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 AKAP7Q9P0M2 348 aaPredicted RBP13.92□□□□□ -0.18
GPC6-201ENST00000377047 VPS51Q9UID3 782 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 SHOC2Q9UQ13 582 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 KRT6AP02538 564 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 KRT6BP04259 564 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 ELNP15502 786 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 NPR3P17342 541 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 BGNP21810 368 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 KRT6CP48668 564 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 CCDC142Q17RM4 750 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 ZC3H12AQ5D1E8 599 aaKnown RBP13.92□□□□□ -0.18
GPC6-201ENST00000377047 ZNF557Q8N988 423 aaPredicted RBP13.92□□□□□ -0.18
GPC6-201ENST00000377047 MCOLN3Q8TDD5 553 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 PIF1Q9H611 641 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 EFCAB1Q9HAE3 211 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 TAS2R13Q9NYV9 303 aa13.92□□□□□ -0.18
GPC6-201ENST00000377047 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.92□□□□□ -0.18
GPC6-201ENST00000377047 A0A087X0B3 334 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 HACD1B0YJ81 288 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 E9PBE3 544 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 KLHL41O60662 606 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 ADH1AP07327 375 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 ELK3P41970 407 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 RUNX1T1Q06455 604 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 CSTF3Q12996 717 aaKnown RBP13.91□□□□□ -0.18
GPC6-201ENST00000377047 PRR23CQ6ZRP0 262 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 PLPPR4Q7Z2D5 763 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 FBXO39Q8N4B4 442 aa13.91□□□□□ -0.18
GPC6-201ENST00000377047 FBXO25Q8TCJ0 367 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms