RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 TBC1D31Q96DN5 1066 aa11.47□□□□□ -0.57
PDPN-202ENST00000376057 VAT1Q99536 393 aa11.47□□□□□ -0.57
PDPN-202ENST00000376057 MTIF3Q9H2K0 278 aaKnown RBP11.47□□□□□ -0.57
PDPN-202ENST00000376057 EIF2B3Q9NR50 452 aaKnown RBP11.47□□□□□ -0.57
PDPN-202ENST00000376057 ETNK2Q9NVF9 386 aa11.47□□□□□ -0.57
PDPN-202ENST00000376057 HEY1Q9Y5J3 304 aa11.47□□□□□ -0.57
PDPN-202ENST00000376057 DRGXA6NNA5 263 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 RIPK2O43353 540 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 OPHN1O60890 802 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 LRIG2O94898 1065 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 RBL1P28749 1068 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 ACTN2P35609 894 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 FDFT1P37268 417 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 ALDH1A3P47895 512 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 COG7P83436 770 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 LILRA6Q6PI73 481 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 HTR3CQ8WXA8 447 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 GDAP1L1Q96MZ0 367 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 HTATIP2Q9BUP3 242 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 PPCSQ9HAB8 311 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 ZMYND8Q9ULU4 1186 aaPredicted RBP11.46□□□□□ -0.57
PDPN-202ENST00000376057 PLAAQ9Y263 795 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 PLXNA4Q9HCM2 1894 aa11.46□□□□□ -0.57
PDPN-202ENST00000376057 ZNF840PA6NDX5 716 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 MFSD11O43934 449 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 STK10O94804 968 aaKnown RBP11.46□□□□□ -0.58
PDPN-202ENST00000376057 TTC4O95801 387 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 LATS1O95835 1130 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 ZSCAN5DPP0CG00 497 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 ETS1P14921 441 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 TNK2Q07912 1038 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 TRIP13Q15645 432 aaPredicted RBP11.46□□□□□ -0.58
PDPN-202ENST00000376057 SDHAF4Q5VUM1 108 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 NUGGCQ68CJ6 796 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 ITIH5Q86UX2 942 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 ZC3H18Q86VM9 953 aaKnown RBP11.46□□□□□ -0.58
PDPN-202ENST00000376057 STKLD1Q8NE28 680 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 RNF34Q969K3 372 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 PSMG2Q969U7 264 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 RUFY1Q96T51 708 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 PRMT1Q99873 361 aaKnown RBP11.46□□□□□ -0.58
PDPN-202ENST00000376057 TMPRSS4Q9NRS4 437 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 SFMBT1Q9UHJ3 866 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 DNMT3LQ9UJW3 386 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 ATP8A1Q9Y2Q0 1164 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 YIPF1Q9Y548 306 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 BRCA2P51587 3418 aa11.46□□□□□ -0.58
PDPN-202ENST00000376057 A0A0A0MRY4 1105 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 SOBPA7XYQ1 873 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 H3BQF6 201 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 KCNN4O15554 427 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 CREB3O43889 395 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 APOEP02649 317 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 RB1P06400 928 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 BMPR1AP36894 532 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 SEMA5AQ13591 1074 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 VEPH1Q14D04 833 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 AGBL2Q5U5Z8 902 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 HEATR6Q6AI08 1181 aaKnown RBP11.45□□□□□ -0.58
PDPN-202ENST00000376057 PLD4Q96BZ4 506 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 SPATA13Q96N96 652 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 MARCH2Q9P0N8 246 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 IGSF9Q9P2J2 1179 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 FETUBQ9UGM5 382 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 TRHDEQ9UKU6 1024 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 HS3ST4Q9Y661 456 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 SLC4A7Q9Y6M7 1214 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 SYNJ2BP-COX16A0A087WUM0 186 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 POU2F2P09086 479 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 CCNCP24863 283 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 CHKAP35790 457 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 NDST2P52849 883 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 RASA2Q15283 850 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 DENND2CQ68D51 928 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 CENPUQ71F23 418 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 NLRP14Q86W24 1093 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 EXOC4Q96A65 974 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 SAMD11Q96NU1 681 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 TMBIM4Q9HC24 238 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 COX16Q9P0S2 106 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 STOML2Q9UJZ1 356 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 IFNB1P01574 187 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 MLNP12872 115 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 RHOQP17081 205 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 RPL17P18621 184 aaKnown RBP11.45□□□□□ -0.58
PDPN-202ENST00000376057 ATP5C1P36542 298 aaKnown RBP11.45□□□□□ -0.58
PDPN-202ENST00000376057 EPHB3P54753 998 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 ARL4CP56559 192 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 ZNF844Q08AG5 666 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 PABPC1LQ4VXU2 614 aaKnown RBP11.45□□□□□ -0.58
PDPN-202ENST00000376057 ARMC3Q5W041 872 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 PDE12Q6L8Q7 609 aaKnown RBP11.45□□□□□ -0.58
PDPN-202ENST00000376057 CCDC149Q6ZUS6 474 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 TMCO2Q7Z6W1 182 aaPredicted RBP11.45□□□□□ -0.58
PDPN-202ENST00000376057 CNPY4Q8N129 248 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 UMODL1-AS1Q8N2C9 162 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 RTL3Q8N8U3 475 aaKnown RBP11.45□□□□□ -0.58
PDPN-202ENST00000376057 UBLCP1Q8WVY7 318 aaPredicted RBP11.45□□□□□ -0.58
PDPN-202ENST00000376057 LRRC39Q96DD0 335 aa11.45□□□□□ -0.58
PDPN-202ENST00000376057 PPP1R2P1Q96PQ5 205 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms