RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 ARHGAP18Q8N392 663 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CCDC33Q8N5R6 958 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 FBF1Q8TES7 1133 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ZNF473Q8WTR7 871 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 HDAC11Q96DB2 347 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 HIPK3Q9H422 1215 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 FAM92AA1XBS5 289 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 RASA4BC9J798 803 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 MTSS1O43312 755 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 RASA4O43374 803 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 TBC1D4O60343 1298 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 MLNP12872 115 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CREB1P16220 341 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 HOXC13P31276 330 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 GALNT2Q10471 571 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ADGRD1Q6QNK2 874 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SLC39A5Q6ZMH5 540 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 TOX2Q96NM4 488 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CYTH2Q99418 400 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 RNF208Q9H0X6 261 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 NMUR1Q9HB89 426 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 IGSF9Q9P2J2 1179 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 NEU3Q9UQ49 428 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 GALTP07902 379 aa18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CCR1P32246 355 aa18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 STX2P32856 288 aa18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SLC18A1P54219 525 aa18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SARNPP82979 210 aaKnown RBP18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 PARP6Q2NL67 630 aa18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 DENND5BQ6ZUT9 1274 aa18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SRRM1Q8IYB3 904 aaKnown RBP18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 LRRC43Q8N309 656 aa18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 NPWQ8N729 165 aa18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 COLGALT1Q8NBJ5 622 aa18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CASP10Q92851 521 aa18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 RNF34Q969K3 372 aa18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SCLYQ96I15 445 aa18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SERPINB11Q96P15 392 aa18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 PAFAH2Q99487 392 aa18.53■□□□□ 0.56
HLA-DQB1-201ENST00000374943 COL4A6Q14031 1691 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 A0A1W2PQH9 124 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 TCRBV9S1A1TA0A576 114 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 H7C4K7 107 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 AVILO75366 819 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 EPHB2P29323 1055 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CCT5P48643 541 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 PGFP49763 221 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 NRG1Q02297 640 aaPredicted RBP18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ZNF33AQ06730 810 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 IFRD2Q12894 506 aaPredicted RBP18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 GPR17Q13304 367 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SYCP2LQ5T4T6 812 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 MANEALQ5VSG8 457 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 C1orf53Q5VUE5 145 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CEP57Q86XR8 500 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ZNF567Q8N184 647 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CCNYQ8ND76 341 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SPPL2BQ8TCT7 592 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 C2orf15Q8WU43 125 aaKnown RBP18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CHMP6Q96FZ7 201 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ZNF317Q96PQ6 595 aaPredicted RBP18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 RABEP2Q9H5N1 569 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 COMMD8Q9NX08 183 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SNX10Q9Y5X0 201 aa18.52■□□□□ 0.56
HLA-DQB1-201ENST00000374943 NYNRINQ9P2P1 1898 aaKnown RBP18.52■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TBKBP1A7MCY6 615 aa18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TRDMT1O14717 391 aaKnown RBP18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 FGF10O15520 208 aaPredicted RBP18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PRPF4O43172 522 aaKnown RBP eCLIP18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 MNX1P50219 401 aaPredicted RBP18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PPARDQ03181 441 aa18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 FAAP100Q0VG06 881 aa18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 MTM1Q13496 603 aa18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 EFTUD2Q15029 972 aaKnown RBP eCLIP18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 DDR2Q16832 855 aa18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 FAM182AQ5T1J6 154 aa18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TP53INP2Q8IXH6 220 aa18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 DCAKDQ8WVC6 231 aa18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SIGLEC10Q96LC7 697 aa18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 CRISPLD2Q9H0B8 497 aa18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SSU72Q9NP77 194 aaKnown RBP18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 HCSTQ9UBK5 93 aa18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 ZC3H7BQ9UGR2 993 aaKnown RBP18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TTLL3Q9Y4R7 772 aa18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 NR2E3Q9Y5X4 410 aa18.51■□□□□ 0.55
HLA-DQB1-201ENST00000374943 MTMR11A4FU01 709 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 KCNU1A8MYU2 1149 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 FOXO6A8MYZ6 492 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 EBAG9O00559 213 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 RTN3O95197 1032 aaPredicted RBP18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 C1QAP02745 245 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PTPN3P26045 913 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 GARSP41250 739 aaKnown RBP18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 GPR15P49685 360 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 PKN2Q16513 984 aaKnown RBP18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 ARTNQ5T4W7 220 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 ANKS3Q6ZW76 656 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SPATS2Q86XZ4 545 aaKnown RBP18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 SPATA17Q96L03 361 aa18.5■□□□□ 0.55
HLA-DQB1-201ENST00000374943 TRABDQ9H4I3 376 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms