RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 DDX18Q9NVP1 670 aaKnown RBP17.81■□□□□ 0.44
PTPRU-202ENST00000373779 GPRC5DQ9NZD1 345 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 TNFSF13BQ9Y275 285 aa17.81■□□□□ 0.44
PTPRU-202ENST00000373779 TMEM247A6NEH6 219 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 FCGR1AP12314 374 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 TERB1Q8NA31 727 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 BHLHE22Q8NFJ8 381 aaPredicted RBP17.8■□□□□ 0.44
PTPRU-202ENST00000373779 CERS2Q96G23 380 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 RNPEPQ9H4A4 650 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 SSU72Q9NP77 194 aaKnown RBP17.8■□□□□ 0.44
PTPRU-202ENST00000373779 MORF4L1Q9UBU8 362 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 ADAM28Q9UKQ2 775 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 SLC8A2Q9UPR5 921 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 GOLGA8TH3BQL2 631 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 CYP1A1P04798 512 aaPredicted RBP17.8■□□□□ 0.44
PTPRU-202ENST00000373779 ROR2Q01974 943 aaKnown RBP17.8■□□□□ 0.44
PTPRU-202ENST00000373779 DHFR2Q86XF0 187 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 RECQLP46063 649 aaPredicted RBP17.8■□□□□ 0.44
PTPRU-202ENST00000373779 ZRANB3Q5FWF4 1079 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 AAGABQ6PD74 315 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 MARK2Q7KZI7 788 aaKnown RBP17.8■□□□□ 0.44
PTPRU-202ENST00000373779 PHF21BQ96EK2 531 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 NMUR2Q9GZQ4 415 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 WDR41Q9HAD4 459 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 TBC1D13Q9NVG8 400 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 VPS9D1Q9Y2B5 631 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 SPATA31C2B4DYI2 1134 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 H0YGN5 161 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 ZMPSTE24O75844 475 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 LHX1P48742 406 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 PTPN20Q4JDL3 420 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 SLC44A4Q53GD3 710 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 NFS1Q9Y697 457 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 H3BRB1 525 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 MRASO14807 208 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 NKRFO15226 690 aaKnown RBP eCLIP17.8■□□□□ 0.44
PTPRU-202ENST00000373779 RGS4P49798 205 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 NUP107P57740 925 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 SPIRE1Q08AE8 756 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 PDK3Q15120 406 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 PTRHD1Q6GMV3 140 aaKnown RBP17.8■□□□□ 0.44
PTPRU-202ENST00000373779 OR52K1Q8NGK4 314 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 ZNF317Q96PQ6 595 aaPredicted RBP17.8■□□□□ 0.44
PTPRU-202ENST00000373779 OSMRQ99650 979 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 DENND2DQ9H6A0 471 aaPredicted RBP17.8■□□□□ 0.44
PTPRU-202ENST00000373779 TUT1Q9H6E5 874 aaKnown RBP17.8■□□□□ 0.44
PTPRU-202ENST00000373779 LATS2Q9NRM7 1088 aa17.8■□□□□ 0.44
PTPRU-202ENST00000373779 TRMT6Q9UJA5 497 aaKnown RBP17.8■□□□□ 0.44
PTPRU-202ENST00000373779 VAPBO95292 243 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 NOMO1Q15155 1222 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 SLC27A1Q6PCB7 646 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.79■□□□□ 0.44
PTPRU-202ENST00000373779 CPNE8Q86YQ8 564 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 ATP6V0D2Q8N8Y2 350 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 ZSCAN18Q8TBC5 510 aaPredicted RBP17.79■□□□□ 0.44
PTPRU-202ENST00000373779 LHX5Q9H2C1 402 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 MYH2Q9UKX2 1941 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 PRR5-ARHGAP8B1AHC4 643 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 C6orf222P0C671 652 aaPredicted RBP17.79■□□□□ 0.44
PTPRU-202ENST00000373779 FASP25445 335 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 ABCG1P45844 678 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 ARHGAP8P85298 464 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 LRRC8BQ6P9F7 803 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 CYP4X1Q8N118 509 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 CDT1Q9H211 546 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 SCN3BQ9NY72 215 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 PLLPQ9Y342 182 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 TGDSO95455 350 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 ERBB2P04626 1255 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 BPGMP07738 259 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 RGS2P41220 211 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 PSTKQ8IV42 348 aaKnown RBP17.79■□□□□ 0.44
PTPRU-202ENST00000373779 DDX50Q9BQ39 737 aaKnown RBP17.79■□□□□ 0.44
PTPRU-202ENST00000373779 RBM22Q9NW64 420 aaKnown RBP eCLIP17.79■□□□□ 0.44
PTPRU-202ENST00000373779 MYRFQ9Y2G1 1151 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 TADA2AO75478 443 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 LYPLA1O75608 230 aaPredicted RBP17.79■□□□□ 0.44
PTPRU-202ENST00000373779 ASMTLO95671 621 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 APOA1P02647 267 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 ACAT1P24752 427 aaKnown RBP17.79■□□□□ 0.44
PTPRU-202ENST00000373779 PTAR1Q7Z6K3 402 aaPredicted RBP17.79■□□□□ 0.44
PTPRU-202ENST00000373779 ERO1BQ86YB8 467 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 B4GALNT2Q8NHY0 566 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 LRRN4Q8WUT4 740 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 LENG9Q96B70 501 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 MAML3Q96JK9 1138 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 GRIP2Q9C0E4 1043 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 SLC13A4Q9UKG4 626 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 CHKBQ9Y259 395 aa17.79■□□□□ 0.44
PTPRU-202ENST00000373779 C2orf71A6NGG8 1288 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 TMEM114B3SHH9 223 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 PHGDHO43175 533 aaKnown RBP17.78■□□□□ 0.44
PTPRU-202ENST00000373779 ITGA2BP08514 1039 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 TPBGLP0DKB5 382 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 KRT72Q14CN4 511 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 GRIK4Q16099 956 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 GALNTL6Q49A17 601 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 THEMIS2Q5TEJ8 643 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 ZNF470Q6ECI4 717 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 OR9Q1Q8NGQ5 310 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms