RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 SERPINB11Q96P15 392 aa8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 KCTD15Q96SI1 283 aaPredicted RBP8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 STN1Q9H668 368 aaKnown RBP8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 LRRC40Q9H9A6 602 aa8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 ETNK1Q9HBU6 452 aa8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 CRTAC1Q9NQ79 661 aa8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 RYDENQ9NUL5 291 aaKnown RBP8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 TXLNGQ9NUQ3 528 aa8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 TMEM161AQ9NX61 479 aa8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 MOCS1Q9NZB8 636 aa8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 BFARQ9NZS9 450 aa8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 DCDC2Q9UHG0 476 aa8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 ADAM28Q9UKQ2 775 aa8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 SORCS3Q9UPU3 1222 aa8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 NME7Q9Y5B8 376 aa8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.98□□□□□ -0.97
SNRNP40-202ENST00000373720 COL4A4P53420 1690 aaPredicted RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 FAM159BA6NKW6 160 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 WASH4PA8MWX3 477 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 TCP11X1B4DZS4 312 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 H7C4K7 107 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 DCLK1O15075 740 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 CACNG3O60359 315 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 GRAP2O75791 330 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 ANXA9O76027 345 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 TMEM63AO94886 807 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 RTN3O95197 1032 aaPredicted RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 IGLV3-25P01717 112 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 NCAM1P13591 858 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 ETS1P14921 441 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 HK2P52789 917 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 PRKAA2P54646 552 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 MAP3K7CLP57077 242 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 TPI1P60174 286 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 YWHAGP61981 247 aaKnown RBP eCLIP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 YWHAHQ04917 246 aaPredicted RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 DSC1Q08554 894 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 GALNT2Q10471 571 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 EIF4EBP2Q13542 120 aaPredicted RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 LPIN1Q14693 890 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 LLGL1Q15334 1064 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 TAF5Q15542 800 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 TBCCQ15814 346 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 UGP2Q16851 508 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 SKIDA1Q1XH10 827 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 TRIM71Q2Q1W2 868 aaKnown RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 FNBP1LQ5T0N5 605 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 RNF187Q5TA31 235 aaPredicted RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 SH3PXD2AQ5TCZ1 1133 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 TTC19Q6DKK2 380 aaPredicted RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 NAPEPLDQ6IQ20 393 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 MARK2Q7KZI7 788 aaKnown RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 OSTM1Q86WC4 334 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 SPATA2LQ8IUW3 424 aaPredicted RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 HOMEZQ8IX15 550 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 LMNTD2Q8IXW0 634 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 MDM1Q8TC05 714 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 DCAKDQ8WVC6 231 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 SCG3Q8WXD2 468 aaKnown RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 STAMBPL1Q96FJ0 436 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 SIGLEC10Q96LC7 697 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 ZFP42Q96MM3 310 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 PKMYT1Q99640 499 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 SMOQ99835 787 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 ADAM2Q99965 735 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 TMEM175Q9BSA9 504 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 TACO1Q9BSH4 297 aaKnown RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 ULBP1Q9BZM6 244 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 IL22Q9GZX6 179 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 WDR6Q9NNW5 1121 aaKnown RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 SAR1AQ9NR31 198 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 TBC1D13Q9NVG8 400 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 DDIT4Q9NX09 232 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 ARHGEF38Q9NXL2 777 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 CLIC5Q9NZA1 410 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 TXNDC16Q9P2K2 825 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 SAE1Q9UBE0 346 aaPredicted RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 PRKAG3Q9UGI9 489 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 GRID1Q9ULK0 1009 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 ABT1Q9ULW3 272 aaKnown RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 MAFFQ9ULX9 164 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 MTO1Q9Y2Z2 717 aaKnown RBP8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 SCN1AP35498 2009 aa8.97□□□□□ -0.97
SNRNP40-202ENST00000373720 HHLA1C9JL84 531 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 COPEO14579 308 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 LPXNO60711 386 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 EDF1O60869 148 aaKnown RBP8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 H2AFYO75367 372 aaKnown RBP8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 AP2A1O95782 977 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 APOA4P06727 396 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 DHRS4L1P0CG22 281 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 GOT1P17174 413 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 TAC1P20366 129 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 SSTR1P30872 391 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 CRHR1P34998 444 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 CCNFP41002 786 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 TNK2Q07912 1038 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 RIPK1Q13546 671 aa8.96□□□□□ -0.98
SNRNP40-202ENST00000373720 TTC31Q49AM3 519 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms