RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 MEA1Q16626 185 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 ARHGAP44Q17R89 818 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 SGSM1Q2NKQ1 1148 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 TUBB8Q3ZCM7 444 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 CLLU1OSQ5K130 101 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 TMEM240Q5SV17 173 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 RAD9BQ6WBX8 426 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 TOGARAM2Q6ZUX3 1019 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 SLC24A5Q71RS6 500 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 CACNA2D4Q7Z3S7 1137 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 DEFB128Q7Z7B8 93 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 C17orf53Q8N3J3 647 aaPredicted RBP3.77□□□□□ -1.81
MCF2-202ENST00000370573 ANKRD42Q8N9B4 389 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 RNF169Q8NCN4 708 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 OLIG1Q8TAK6 271 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 SEPT8Q92599 483 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 SYN2Q92777 582 aaPredicted RBP3.77□□□□□ -1.81
MCF2-202ENST00000370573 IQCDQ96DY2 449 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 HSPBAP1Q96EW2 488 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 TCTN2Q96GX1 697 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 ANKRD36BP1Q96IX9 119 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 NT5C1BQ96P26 610 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 BAG1Q99933 345 aaPredicted RBP3.77□□□□□ -1.81
MCF2-202ENST00000370573 MCMBPQ9BTE3 642 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 HDAC8Q9BY41 377 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 RNF32Q9H0A6 362 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 SDCBP2Q9H190 292 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 AIPL1Q9NZN9 384 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 ARHGAP20Q9P2F6 1191 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 CACNG4Q9UBN1 327 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 FBXL21Q9UKT6 434 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 AGAP1Q9UPQ3 857 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 PDCD11Q14690 1871 aaKnown RBP3.77□□□□□ -1.81
MCF2-202ENST00000370573 SCN1AP35498 2009 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 ALPK3Q96L96 1907 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 SSU72P8A0A1W2PR75 194 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 HMGB1P1B2RPK0 211 aaPredicted RBP3.77□□□□□ -1.81
MCF2-202ENST00000370573 F8VZ95 297 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 PIRO00625 290 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 INPPL1O15357 1258 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 B4GALT3O60512 393 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 ZC3H11AO75152 810 aaKnown RBP eCLIP3.77□□□□□ -1.81
MCF2-202ENST00000370573 GFPT2O94808 682 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 PRAMEF1O95521 474 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 SCG5P05408 212 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 KRT19P08727 400 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 TPM1P09493 284 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 WEE2P0C1S8 567 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 FAM163BP0C2L3 166 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 RBP3P10745 1247 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 GATMP50440 423 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 SCNN1GP51170 649 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 CDH8P55286 799 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 RBP5P82980 135 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 CDK17Q00537 523 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 GCNT1Q02742 428 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 TEKQ02763 1124 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 TRPC3Q13507 836 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 SIM2Q14190 667 aaPredicted RBP3.77□□□□□ -1.81
MCF2-202ENST00000370573 ASTE1Q2TB18 679 aaPredicted RBP3.77□□□□□ -1.81
MCF2-202ENST00000370573 GPR158Q5T848 1215 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 SFMBT2Q5VUG0 894 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 C9orf57Q5W0N0 161 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 CD300LGQ6UXG3 332 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.77□□□□□ -1.81
MCF2-202ENST00000370573 C16orf59Q7L2K0 433 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 KIF18BQ86Y91 864 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 FAM71AQ8IYT1 594 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 ZNF397Q8NF99 534 aaPredicted RBP3.77□□□□□ -1.81
MCF2-202ENST00000370573 SHC3Q92529 594 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 CCDC120Q96HB5 630 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 HPDLQ96IR7 371 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 TSPAN18Q96SJ8 248 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 SMOC1Q9H4F8 434 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 RSAD1Q9HA92 442 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 NGRNQ9NPE2 291 aaKnown RBP3.77□□□□□ -1.81
MCF2-202ENST00000370573 ACP6Q9NPH0 428 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 MAN1C1Q9NR34 630 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 TMEFF2Q9UIK5 374 aaPredicted RBP3.77□□□□□ -1.81
MCF2-202ENST00000370573 ITGA11Q9UKX5 1188 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 TCFL5Q9UL49 500 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 MYO6Q9UM54 1294 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 UBQLN1Q9UMX0 589 aaKnown RBP3.77□□□□□ -1.81
MCF2-202ENST00000370573 ZKSCAN5Q9Y2L8 839 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 GIT1Q9Y2X7 761 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 RALGAPA2Q2PPJ7 1873 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 TANC1Q9C0D5 1861 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 A0A0U1RQJ8 604 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 ZNF263O14978 683 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 TGM5O43548 720 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 PSPNO60542 156 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 POMCP01189 267 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 SERPING1P05155 500 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 CSF2RAP15509 400 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 CHRNB2P17787 502 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 CYP3A5P20815 502 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 LRPAP1P30533 357 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 HOXC12P31275 282 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 STAT1P42224 750 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 MECP2P51608 486 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms