RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 GYPCP04921 128 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 NEK3P51956 506 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 KLHDC7AQ5VTJ3 777 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 DENND5BQ6ZUT9 1274 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 CAPSLQ8WWF8 208 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 C3orf18Q9UK00 162 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.7□□□□□ -0.38
TPR-201ENST00000367478 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.386e-7■■■■□ 21.5
TPR-201ENST00000367478 SPP2Q13103 211 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 RNF145Q96MT1 663 aa12.7□□□□□ -0.38
TPR-201ENST00000367478 TNPO3Q9Y5L0 923 aaKnown RBP12.7□□□□□ -0.38
TPR-201ENST00000367478 AP3D1O14617 1153 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 MED24O75448 989 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 ZNF135P52742 658 aaPredicted RBP12.69□□□□□ -0.38
TPR-201ENST00000367478 RPL10AP62906 217 aaKnown RBP12.69□□□□□ -0.38
TPR-201ENST00000367478 TNFAIP8L3Q5GJ75 292 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 MCOLN3Q8TDD5 553 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 FAM172AQ8WUF8 416 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 PANX3Q96QZ0 392 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 GPN1Q9HCN4 374 aaPredicted RBP12.69□□□□□ -0.38
TPR-201ENST00000367478 NCF1BA6NI72 391 aaPredicted RBP12.69□□□□□ -0.38
TPR-201ENST00000367478 NCF1CA8MVU1 366 aaPredicted RBP12.69□□□□□ -0.38
TPR-201ENST00000367478 KCNH1O95259 989 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 STAG3L1P0CL83 205 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 NCF1P14598 390 aaPredicted RBP12.69□□□□□ -0.38
TPR-201ENST00000367478 EIF2S3P41091 472 aaKnown RBP12.69□□□□□ -0.38
TPR-201ENST00000367478 GALNT18Q6P9A2 607 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 AGMOQ6ZNB7 445 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 STK40Q8N2I9 435 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 ZNF655Q8N720 491 aaPredicted RBP12.69□□□□□ -0.38
TPR-201ENST00000367478 CHKBQ9Y259 395 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 C15orf41Q9Y2V0 281 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 METP08581 1390 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 LOC100506127A0A0U1RQW1 187 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 CES2O00748 559 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 HOXA2O43364 376 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 SLC2A4P14672 509 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 KCNJ1P48048 391 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 PROSER3Q2NL68 480 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 AKIRIN2Q53H80 203 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 MED8Q96G25 268 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 INVSQ9Y283 1065 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 ZNF879B4DU55 563 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 PTPN1P18031 435 aaKnown RBP12.69□□□□□ -0.38
TPR-201ENST00000367478 PYHIN1Q6K0P9 492 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 EVA1BQ9NVM1 165 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 MCM8Q9UJA3 840 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 CDHR2Q9BYE9 1310 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 POLRMTO00411 1230 aaKnown RBP12.69□□□□□ -0.38
TPR-201ENST00000367478 C5orf22Q49AR2 442 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 BTN2A1Q7KYR7 527 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 PALLDQ8WX93 1383 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 A0A087X1B8 175 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 ETS1P14921 441 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 TUBA4AP68366 448 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 GALNT3Q14435 633 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 CCNG2Q16589 344 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 EPS8L3Q8TE67 593 aaKnown RBP12.69□□□□□ -0.38
TPR-201ENST00000367478 RASSF5Q8WWW0 418 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 TMEM159Q96B96 161 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 PCDH9Q9HC56 1237 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 SAGE2PA6NJ88 616 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 SEC24AO95486 1093 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 CHRNGP07510 517 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 ALDH9A1P49189 494 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 INSCQ1MX18 579 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 FBXO39Q8N4B4 442 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 TC2NQ8N9U0 490 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 FAM129BQ96TA1 746 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 UBOX5O94941 541 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 SAMD3Q8N6K7 520 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 DCUN1D5Q9BTE7 237 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 PLAGL2Q9UPG8 496 aa12.69□□□□□ -0.38
TPR-201ENST00000367478 RAPGEFL1Q9UHV5 662 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 ZNF222Q9UK12 451 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 MFHAS1Q9Y4C4 1052 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 MYH7P12883 1935 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 RPA1P27694 616 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 CD151P48509 253 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 SLC15A2Q16348 729 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 MINPP1Q9UNW1 487 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 CASZ1Q86V15 1759 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 SLC25A27O95847 323 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 NPY2RP49146 381 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 POLR2LP62875 67 aaKnown RBP12.68□□□□□ -0.38
TPR-201ENST00000367478 CYP20A1Q6UW02 462 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 CASKIN2Q8WXE0 1202 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 SAE1Q9UBE0 346 aaPredicted RBP12.68□□□□□ -0.38
TPR-201ENST00000367478 PI16Q6UXB8 463 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 CAB39LQ9H9S4 337 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 L1RE1Q9UN81 338 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 PLA2G4CQ9UP65 541 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 TRDMT1O14717 391 aaKnown RBP12.68□□□□□ -0.38
TPR-201ENST00000367478 ZNF7P17097 686 aaPredicted RBP12.68□□□□□ -0.38
TPR-201ENST00000367478 ITGB6P18564 788 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 SLC26A3P40879 764 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 OR1G1P47890 313 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 CHN2P52757 468 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 SWI5Q1ZZU3 235 aa12.68□□□□□ -0.38
TPR-201ENST00000367478 MRPS31Q92665 395 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms