RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 MFSD14AQ96MC6 490 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 IL1RL2Q9HB29 575 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 FRMD3A2A2Y4 597 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 SIGLEC16A6NMB1 481 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 ZSWIM2Q8NEG5 633 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 MAGEB16A2A368 324 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 PLA2G4AP47712 749 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 PRKAA1Q13131 559 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 ZC3H12AQ5D1E8 599 aaKnown RBP11.87□□□□□ -0.51
SYNE1-204ENST00000367248 ATAT1Q5SQI0 421 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 AMIGO3Q86WK7 504 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 KATNAL2Q8IYT4 538 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 TOP6BLQ8N6T0 577 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 ERP27Q96DN0 273 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 MCRS1Q96EZ8 462 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 BBS2Q9BXC9 721 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 SOHLH2Q9NX45 425 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 GGT7Q9UJ14 662 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 DTNAQ9Y4J8 743 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 GPR25O00155 361 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 RNF103O00237 685 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 O00370 1275 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 ENO1P06733 434 aaKnown RBP11.87□□□□□ -0.51
SYNE1-204ENST00000367248 RPSAP08865 295 aaKnown RBP11.87□□□□□ -0.51
SYNE1-204ENST00000367248 PGM1P36871 562 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 ZNF143P52747 638 aaPredicted RBP11.87□□□□□ -0.51
SYNE1-204ENST00000367248 KCNMA1Q12791 1236 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 RARS2Q5T160 578 aaKnown RBP11.87□□□□□ -0.51
SYNE1-204ENST00000367248 RGS9BPQ6ZS82 235 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 SIX5Q8N196 739 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 CXorf38Q8TB03 319 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 MYLPFQ96A32 169 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 PRDM16Q9HAZ2 1276 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 CLDND1Q9NY35 253 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 TAS2R14Q9NYV8 317 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 UBA2Q9UBT2 640 aaPredicted RBP11.87□□□□□ -0.51
SYNE1-204ENST00000367248 OR12D3Q9UGF7 316 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 CDYLQ9Y232 598 aa11.87□□□□□ -0.51
SYNE1-204ENST00000367248 GLI1P08151 1106 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 GLRBP48167 497 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 SEC13P55735 322 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 DUSP4Q13115 394 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 POU6F1Q14863 301 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 SLC24A2Q9UI40 661 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 MTO1Q9Y2Z2 717 aaKnown RBP11.86□□□□□ -0.51
SYNE1-204ENST00000367248 MYO1CO00159 1063 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 CLDN5O00501 218 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 AMD1P17707 334 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 NR2C2P49116 596 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 PSEN1P49768 467 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 CREMQ03060 361 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 MAMLD1Q13495 774 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 UBXN2BQ14CS0 331 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 STRA8Q7Z7C7 330 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 VPS37AQ8NEZ2 397 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 LNX1Q8TBB1 728 aaPredicted RBP11.86□□□□□ -0.51
SYNE1-204ENST00000367248 ZNF473Q8WTR7 871 aaKnown RBP11.86□□□□□ -0.51
SYNE1-204ENST00000367248 ANKRD7Q92527 254 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 GPAMQ9HCL2 828 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 PCDHB9Q9Y5E1 797 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 PCDHGC5Q9Y5F6 944 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 CFAP73A6NFT4 308 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 OR6C75A6NL08 312 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 KLHL2O95198 593 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 IGSF6O95976 241 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 PECAM1P16284 738 aaPredicted RBP11.86□□□□□ -0.51
SYNE1-204ENST00000367248 GPC1P35052 558 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 C15orf59Q2T9L4 293 aaPredicted RBP11.86□□□□□ -0.51
SYNE1-204ENST00000367248 BTN2A2Q8WVV5 523 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 BRI3BPQ8WY22 251 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 PAWRQ96IZ0 340 aaKnown RBP11.86□□□□□ -0.51
SYNE1-204ENST00000367248 SMAD5Q99717 465 aaKnown RBP11.86□□□□□ -0.51
SYNE1-204ENST00000367248 TEX12Q9BXU0 123 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 KLF15Q9UIH9 416 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 SCOCQ9UIL1 159 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 HACD1B0YJ81 288 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 TBL1XO60907 577 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 GRK3P35626 688 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 APLP1P51693 650 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 XRCC4Q13426 336 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 DET1Q7L5Y6 550 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 TRAPPC5Q8IUR0 188 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 SPATA20Q8TB22 786 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 BSNDQ8WZ55 320 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 PRPF18Q99633 342 aaKnown RBP11.86□□□□□ -0.51
SYNE1-204ENST00000367248 MRPL1Q9BYD6 325 aaKnown RBP11.86□□□□□ -0.51
SYNE1-204ENST00000367248 DNAJC16Q9Y2G8 782 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 GPSM3Q9Y4H4 160 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 RBP1P09455 135 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 SMPD1P17405 629 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 NOMO3P69849 1222 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 PWP1Q13610 501 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 SETMARQ53H47 684 aaPredicted RBP11.86□□□□□ -0.51
SYNE1-204ENST00000367248 SLC51AQ86UW1 340 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 TCF25Q9BQ70 676 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 RHBGQ9H310 441 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 C11orf49Q9H6J7 331 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 SEPT3Q9UH03 358 aa11.86□□□□□ -0.51
SYNE1-204ENST00000367248 ELK3P41970 407 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 FMO1Q01740 532 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms