RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 CNGA2Q16280 664 aa11.61□□□□□ -0.55
H3F3A-203ENST00000366815 BSPRYQ5W0U4 402 aa11.61□□□□□ -0.55
H3F3A-203ENST00000366815 RSRC2Q7L4I2 434 aaKnown RBP11.61□□□□□ -0.55
H3F3A-203ENST00000366815 DENND1CQ8IV53 801 aa11.61□□□□□ -0.55
H3F3A-203ENST00000366815 ARHGEF19Q8IW93 802 aa11.61□□□□□ -0.55
H3F3A-203ENST00000366815 TRIML1Q8N9V2 468 aa11.61□□□□□ -0.55
H3F3A-203ENST00000366815 PLD4Q96BZ4 506 aa11.61□□□□□ -0.55
H3F3A-203ENST00000366815 KREMEN1Q96MU8 473 aa11.61□□□□□ -0.55
H3F3A-203ENST00000366815 SRRTQ9BXP5 876 aaKnown RBP11.61□□□□□ -0.55
H3F3A-203ENST00000366815 CNGB3Q9NQW8 809 aa11.61□□□□□ -0.55
H3F3A-203ENST00000366815 OLA1Q9NTK5 396 aaKnown RBP11.61□□□□□ -0.55
H3F3A-203ENST00000366815 BCCIPQ9P287 314 aaKnown RBP eCLIP11.61□□□□□ -0.55
H3F3A-203ENST00000366815 SLC27A6Q9Y2P4 619 aa11.61□□□□□ -0.55
H3F3A-203ENST00000366815 PCDHB4Q9Y5E5 795 aa11.61□□□□□ -0.55
H3F3A-203ENST00000366815 CKAP5Q14008 2032 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 MUC22E2RYF6 1773 aaPredicted RBP11.6□□□□□ -0.55
H3F3A-203ENST00000366815 GFRA2O00451 464 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 CALCAP01258 141 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 RHOQP17081 205 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 BRD2P25440 801 aaKnown RBP11.6□□□□□ -0.55
H3F3A-203ENST00000366815 CETN1Q12798 172 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 STILQ15468 1287 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 PPM1JQ5JR12 505 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 STPG1Q5TH74 334 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 KIAA1211LQ6NV74 962 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 PMF1Q6P1K2 205 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 MSANTD2Q6P1R3 559 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 RRAGAQ7L523 313 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 FMNL3Q8IVF7 1028 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 CHPFQ8IZ52 775 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 SIX6OS1Q8N1H7 587 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 RBBP8NLQ8NC74 664 aaPredicted RBP11.6□□□□□ -0.55
H3F3A-203ENST00000366815 RHBDD1Q8TEB9 315 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 IPO4Q8TEX9 1081 aaKnown RBP11.6□□□□□ -0.55
H3F3A-203ENST00000366815 EDEM1Q92611 657 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 SPACA7Q96KW9 195 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 IPO9Q96P70 1041 aaKnown RBP11.6□□□□□ -0.55
H3F3A-203ENST00000366815 MED15Q96RN5 788 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 CNTN6Q9UQ52 1028 aa11.6□□□□□ -0.55
H3F3A-203ENST00000366815 HBS1LQ9Y450 684 aaKnown RBP11.6□□□□□ -0.55
H3F3A-203ENST00000366815 PI4KAP42356 2102 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 LNP1A1A4G5 178 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 PATE3B3GLJ2 98 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 M0QYV0 167 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 AFPP02771 609 aaKnown RBP11.59□□□□□ -0.55
H3F3A-203ENST00000366815 ADRB1P08588 477 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 LCP1P13796 627 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 PTGER3P43115 390 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 DHPSP49366 369 aaPredicted RBP11.59□□□□□ -0.55
H3F3A-203ENST00000366815 RGS7P49802 495 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 UBE2HP62256 183 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 ENPP2Q13822 863 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 BYSLQ13895 437 aaKnown RBP11.59□□□□□ -0.55
H3F3A-203ENST00000366815 GEN1Q17RS7 908 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 SPDYCQ5MJ68 293 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 IL31Q6EBC2 164 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 LPCAT2Q7L5N7 544 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 TMEFF1Q8IYR6 380 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 PGBD3Q8N328 593 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 RNF139Q8WU17 664 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 IRGQQ8WZA9 623 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 PIWIL1Q96J94 861 aaKnown RBP11.59□□□□□ -0.55
H3F3A-203ENST00000366815 EDEM2Q9BV94 578 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 INTS2Q9H0H0 1204 aaKnown RBP11.59□□□□□ -0.55
H3F3A-203ENST00000366815 ABCC13Q9NSE7 274 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 CACNA2D2Q9NY47 1150 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 SCHIP1Q9P0W5 487 aaPredicted RBP11.59□□□□□ -0.55
H3F3A-203ENST00000366815 CALCOCO1Q9P1Z2 691 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 SFMBT1Q9UHJ3 866 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 STOML2Q9UJZ1 356 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 CLEC4EQ9ULY5 219 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.59□□□□□ -0.55
H3F3A-203ENST00000366815 RAD54BQ9Y620 910 aa11.59□□□□□ -0.55
H3F3A-203ENST00000366815 GON4LQ3T8J9 2241 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 IGHV1OR15-9A0A0B4J2B8 117 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 WASH3PC4AMC7 463 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 PIK3R2O00459 728 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 CDK2AP1O14519 115 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 MSI1O43347 362 aaKnown RBP11.58□□□□□ -0.56
H3F3A-203ENST00000366815 IGLV3-27P01718 113 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 CYBBP04839 570 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 HOXD9P28356 352 aaPredicted RBP11.58□□□□□ -0.56
H3F3A-203ENST00000366815 RPL34P49207 117 aaKnown RBP11.58□□□□□ -0.56
H3F3A-203ENST00000366815 EPHA4P54764 986 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 CAMK4Q16566 473 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 PEAR1Q5VY43 1037 aaPredicted RBP11.58□□□□□ -0.56
H3F3A-203ENST00000366815 RNF43Q68DV7 783 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 SDE2Q6IQ49 451 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 TSEN2Q8NCE0 465 aaKnown RBP11.58□□□□□ -0.56
H3F3A-203ENST00000366815 CLEC4CQ8WTT0 213 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 DDX1Q92499 740 aaKnown RBP11.58□□□□□ -0.56
H3F3A-203ENST00000366815 MRGPRX1Q96LB2 322 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 HSFY1Q96LI6 401 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 SLC2A11Q9BYW1 496 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 THAP10Q9P2Z0 257 aaPredicted RBP11.58□□□□□ -0.56
H3F3A-203ENST00000366815 EVLQ9UI08 416 aaPredicted RBP11.58□□□□□ -0.56
H3F3A-203ENST00000366815 RWDD2AQ9UIY3 292 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 STON1Q9Y6Q2 735 aa11.58□□□□□ -0.56
H3F3A-203ENST00000366815 KHNYNO15037 678 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms