RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 BIRC3Q13489 604 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 DCTN1Q14203 1278 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 CEP78Q5JTW2 689 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 DGAT2L7PQ6IED9 249 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 PRIMA1Q86XR5 153 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 C16orf71Q8IYS4 520 aaPredicted RBP4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 SPPL3Q8TCT6 385 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 ZNF398Q8TD17 642 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 ASB12Q8WXK4 309 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 DDB2Q92466 427 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 ZNF845Q96IR2 970 aaPredicted RBP4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 SH2D3AQ9BRG2 576 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 TM2D2Q9BX73 214 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 RNF26Q9BY78 433 aaPredicted RBP4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 TWSG1Q9GZX9 223 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 SLITRK6Q9H5Y7 841 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 G6PC2Q9NQR9 355 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 ARL8BQ9NVJ2 186 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 SAGE1Q9NXZ1 904 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 SIRT4Q9Y6E7 314 aaPredicted RBP4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 CYP3A7-CYP3A51PA0A087WV96 503 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 MBD3L5A6NJ08 208 aaPredicted RBP4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 CREB3O43889 395 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 RBMXL2O75526 392 aaKnown RBP4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 LATS1O95835 1130 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 CKMT1AP12532 417 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 CYP3A7P24462 503 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 YPEL5P62699 121 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 DMWDQ09019 674 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 RAPGEF1Q13905 1077 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 SMN1Q16637 294 aaKnown RBP4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 TBRG1Q3YBR2 411 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 ANKRD45Q5TZF3 282 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 SLC39A5Q6ZMH5 540 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 RFX6Q8HWS3 928 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 DNAJC10Q8IXB1 793 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 SMAP1Q8IYB5 467 aaPredicted RBP4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 SRFBP1Q8NEF9 429 aaKnown RBP4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 NTN5Q8WTR8 489 aaPredicted RBP4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 THAP4Q8WY91 577 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 MAP4K1Q92918 833 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 ZNF764Q96H86 408 aaPredicted RBP4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 HERC2P3Q9BVR0 1158 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 PLEKHA2Q9HB19 425 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 PDGFCQ9NRA1 345 aa4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 COPG1Q9Y678 874 aaKnown RBP4.81□□□□□ -1.64
RNU6-560P-201ENST00000364007 EIF3FO00303 357 aaPredicted RBP4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 ALDOAP04075 364 aaKnown RBP4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 TK1P04183 234 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 ENO1P06733 434 aaKnown RBP4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 HSD3B1P14060 373 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 IGFBP2P18065 325 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 CCT5P48643 541 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 NANOS3P60323 173 aaKnown RBP4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 ACTR2P61160 394 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 ADCK5Q3MIX3 580 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 ZNF484Q5JVG2 852 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 FBXO47Q5MNV8 452 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 DHRS13Q6UX07 377 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 ZNF813Q6ZN06 617 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 C2CD5Q86YS7 1000 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 RHPN2Q8IUC4 686 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 ANKRD18AQ8IVF6 992 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 ADGRF3Q8IZF5 1079 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 EXD3Q8N9H8 876 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 OSR1Q8TAX0 266 aaPredicted RBP4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 NELL1Q92832 810 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 ARRDC3Q96B67 414 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 SDCCAG3Q96C92 435 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 GCC1Q96CN9 775 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 UBXN10Q96LJ8 280 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 ZSCAN31Q96LW9 406 aaPredicted RBP4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 COG8Q96MW5 612 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 SENP7Q9BQF6 1050 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 ABHD14AQ9BUJ0 271 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 QTRT1Q9BXR0 403 aaKnown RBP4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 OSBPL5Q9H0X9 879 aaPredicted RBP4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 PDE11AQ9HCR9 933 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 ADARB2Q9NS39 739 aaKnown RBP4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 RRN3Q9NYV6 651 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 KLHL13Q9P2N7 655 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 BAG5Q9UL15 447 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 LMTK3Q96Q04 1460 aa4.8□□□□□ -1.64
RNU6-560P-201ENST00000364007 WDR17Q8IZU2 1322 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 C3orf70A6NLC5 250 aaPredicted RBP4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 STX16-NPEPL1H3BU86 382 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 STX16O14662 325 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 CNTN5O94779 1100 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 ALDOCP09972 364 aaKnown RBP4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 LYL1P12980 280 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 ST6GAL1P15907 406 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 SOX2P48431 317 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 MTA1Q13330 715 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 FAM110CQ1W6H9 321 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 CYP26C1Q6V0L0 522 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 PTF1AQ7RTS3 328 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 SLC2A12Q8TD20 617 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 PPM1EQ8WY54 764 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms