RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 CCDC34Q96HJ3 373 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 VPS50Q96JG6 964 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CMTM3Q96MX0 182 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 OSBPL9Q96SU4 736 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PIP5K1AQ99755 562 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 C17orf80Q9BSJ5 609 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 C2orf40Q9H1Z8 148 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NDST4Q9H3R1 872 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SH2D4AQ9H788 454 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ARHGEF3Q9NR81 526 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 GIMAP4Q9NUV9 329 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 THAP1Q9NVV9 213 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TAB2Q9NYJ8 693 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 VSX1Q9NZR4 365 aaPredicted RBP3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NTMQ9P121 344 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SSX2IPQ9Y2D8 614 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CCL27Q9Y4X3 112 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PCDHGB5Q9Y5G0 923 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SNX14Q9Y5W7 946 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZFP37Q9Y6Q3 630 aaPredicted RBP3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 GPRASP1Q5JY77 1395 aa3.99□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MYOCOSA0A1B0GUC4 107 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 C17orf113A0A1B0GUU1 675 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FAM237BA0A1B0GVD1 139 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FRMD3A2A2Y4 597 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 C3orf70A6NLC5 250 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZAR1LA6NP61 321 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 A8MVJ9 347 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 A8MXE2 369 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ADAM20O43506 726 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SEMA7AO75326 666 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 IPO13O94829 963 aaKnown RBP3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PDE8BO95263 885 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TGDSO95455 350 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PLATP00750 562 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 KRT1P04264 644 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 C1SP09871 688 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ALADP13716 330 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 IFNAR1P17181 557 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SSTR4P31391 388 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CPOXP36551 454 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 HSD17B4P51659 736 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZNF41P51814 821 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TMEM115Q12893 351 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 DYRK1AQ13627 763 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ASIC2Q16515 512 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NTRK2Q16620 822 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 AASDHQ4L235 1098 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SLC9B1Q4ZJI4 515 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 HMBOX1Q6NT76 420 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 WDR93Q6P2C0 686 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FOXR2Q6PJQ5 311 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MICALCLQ6ZW33 695 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 DNAJB7Q7Z6W7 309 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MON1AQ86VX9 555 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FAM109AQ8N4B1 249 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 METTL25Q8N6Q8 603 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TXNDC5Q8NBS9 432 aaKnown RBP3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 OR52N2Q8NGI0 321 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 GSDMBQ8TAX9 411 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NEK9Q8TD19 979 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NCSTNQ92542 709 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SMARCE1Q969G3 411 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 INTS12Q96CB8 462 aaKnown RBP3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 KLHL29Q96CT2 875 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RSPRY1Q96DX4 576 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZNF764Q96H86 408 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZNF845Q96IR2 970 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MAP7D2Q96T17 732 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 LBHD1Q9BQE6 289 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 DESI2Q9BSY9 194 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 HTATIP2Q9BUP3 242 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MCOLN1Q9GZU1 580 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CLPBQ9H078 707 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TTYH1Q9H313 450 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CD248Q9HCU0 757 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 HSFX1Q9UBD0 423 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CDH22Q9UJ99 828 aa3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CYP3A7-CYP3A51PA0A087WV96 503 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PRAMEF33A0A0G2JMD5 474 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TEX13CA0A0J9YWL9 993 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 A0A1W2PS29 197 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 GRM8O00222 908 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PSMD9O00233 223 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MATN2O00339 956 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZNF213O14771 459 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PSMA7O14818 248 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SYN3O14994 580 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TP73O15350 636 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PRAMEF10O60809 474 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ENTPD3O75355 529 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 OR2C1O95371 312 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ITGB2P05107 769 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 INHBBP09529 407 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CYP3A7P24462 503 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 HNF1BP35680 557 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ATP6V1E1P36543 226 aa3.97□□□□□ -1.77
RNU6-1249P-201ENST00000363237 THPOP40225 353 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms