RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 CCDC26Q8TAB7 109 aa14.29□□□□□ -0.12
NSMCE1-201ENST00000361439 BTBD6Q96KE9 485 aa14.29□□□□□ -0.12
NSMCE1-201ENST00000361439 SIK2Q9H0K1 926 aa14.29□□□□□ -0.12
NSMCE1-201ENST00000361439 HEBP1Q9NRV9 189 aa14.29□□□□□ -0.12
NSMCE1-201ENST00000361439 DONSONQ9NYP3 566 aa14.29□□□□□ -0.12
NSMCE1-201ENST00000361439 XPO7Q9UIA9 1087 aaKnown RBP14.29□□□□□ -0.12
NSMCE1-201ENST00000361439 MRPS17Q9Y2R5 130 aaKnown RBP14.29□□□□□ -0.12
NSMCE1-201ENST00000361439 A0A0A0MRY4 1105 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 NEDD8-MDP1E9PL57 170 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 I6L893 689 aaPredicted RBP14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 TNFRSF10AO00220 468 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 SCAMP3O14828 347 aaKnown RBP14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 ZSCAN12O43309 604 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 CLDN11O75508 207 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 HOXD9P28356 352 aaPredicted RBP14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 HCAR3P49019 387 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 NAP1L1P55209 391 aaKnown RBP14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 MUC3AQ02505 3323 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 DPYSL2Q16555 572 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 GAB4Q2WGN9 574 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 RAB6CQ53S08 254 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 RFWD3Q6PCD5 774 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 TRIM67Q6ZTA4 783 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 VSIG1Q86XK7 387 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 CCDC117Q8IWD4 279 aaPredicted RBP14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 ETFBKMTQ8IXQ9 262 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 ZNF683Q8IZ20 524 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 SYCE1Q8N0S2 351 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 LGI2Q8N0V4 545 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 TPCN2Q8NHX9 752 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 RPRD1AQ96P16 312 aaPredicted RBP14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 EPAS1Q99814 870 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 OSBPL6Q9BZF3 934 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 RAB6CQ9H0N0 254 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 KCNF1Q9H3M0 494 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 ANLNQ9NQW6 1124 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 AP4E1Q9UPM8 1137 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 SLC27A6Q9Y2P4 619 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 PPP2R2CQ9Y2T4 447 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 DUSP10Q9Y6W6 482 aa14.28□□□□□ -0.12
NSMCE1-201ENST00000361439 GOLGA6L7A0A1B0GV03 622 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 A0A1B0GVM2 712 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 TCAF2A6NFQ2 919 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 E9PAM4 449 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 BUB1BO60566 1050 aaPredicted RBP14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 HOXC13P31276 330 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 CDH4P55283 916 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 SEMA3BQ13214 749 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 E2F5Q15329 346 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 MANEALQ5VSG8 457 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 TPRG1Q6ZUI0 275 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 CYP4V2Q6ZWL3 525 aaPredicted RBP14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 DAAM2Q86T65 1068 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 FIBINQ8TAL6 211 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 CD101Q93033 1021 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 PRICKLE1Q96MT3 831 aaPredicted RBP14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 SNRNP25Q9BV90 132 aaKnown RBP14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 RCOR3Q9P2K3 495 aaPredicted RBP14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 DEC1Q9P2X7 70 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 PCSK1NQ9UHG2 260 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 SALL4Q9UJQ4 1053 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 VANGL2Q9ULK5 521 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 ALG6Q9Y672 507 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 F5P12259 2224 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 COL4A2P08572 1712 aa14.27□□□□□ -0.13
NSMCE1-201ENST00000361439 FGF10O15520 208 aaPredicted RBP14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 PSTPIP1O43586 416 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 SPOPO43791 374 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 TBL1XO60907 577 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 RARAP10276 462 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 DRD1P21728 446 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 IL1R2P27930 398 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 OPRD1P41143 372 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 GRIA2P42262 883 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 VCPP55072 806 aaKnown RBP14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 GRSF1Q12849 480 aaKnown RBP eCLIP14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 SLC12A1Q13621 1099 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 PDK2Q15119 407 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 FBXO43Q4G163 708 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 SETD3Q86TU7 594 aaPredicted RBP14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 MAP7D3Q8IWC1 876 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 RHOT1Q8IXI2 618 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 SIX5Q8N196 739 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 SYNPOQ8N3V7 929 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 LRRC57Q8N9N7 239 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 FAM71BQ8TC56 605 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 KIAA1524Q8TCG1 905 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 FAM3CQ92520 227 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 TBC1D31Q96DN5 1066 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 CHFRQ96EP1 664 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 PEBP4Q96S96 227 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 PNKPQ96T60 521 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 P2RY13Q9BPV8 354 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 ZYG11BQ9C0D3 744 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 ZWILCHQ9H900 591 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 TFR2Q9UP52 801 aa14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.26□□□□□ -0.13
NSMCE1-201ENST00000361439 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.25□□□□□ -0.13
NSMCE1-201ENST00000361439 KANSL1LA0AUZ9 987 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms