RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 NDFIP2Q9NV92 336 aa10.19□□□□□ -0.78
SIN3A-201ENST00000360439 ZNF112Q9UJU3 913 aa10.19□□□□□ -0.78
SIN3A-201ENST00000360439 VPS4AQ9UN37 437 aa10.19□□□□□ -0.78
SIN3A-201ENST00000360439 TRPV2Q9Y5S1 764 aa10.19□□□□□ -0.78
SIN3A-201ENST00000360439 NUP98P52948 1817 aa10.19□□□□□ -0.78
SIN3A-201ENST00000360439 MROH7Q68CQ1 1323 aa10.19□□□□□ -0.78
SIN3A-201ENST00000360439 SPATA31C2B4DYI2 1134 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 DDX3YO15523 660 aaKnown RBP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 KRT37O76014 449 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 WFS1O76024 890 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 YWHAGP61981 247 aaKnown RBP eCLIP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 CCNG2Q16589 344 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 MGAT5BQ3V5L5 792 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 MFSD5Q6N075 450 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 LVRNQ6Q4G3 990 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 SPATA18Q8TC71 538 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 TNIP3Q96KP6 325 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 ADAM2Q99965 735 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 TBC1D14Q9P2M4 693 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 SALL4Q9UJQ4 1053 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 STXBP5LQ9Y2K9 1186 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 PTCH2Q9Y6C5 1203 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 SYNCRIPO60506 623 aaKnown RBP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 PPP1R11O60927 126 aaPredicted RBP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 SKIV2L2P42285 1042 aaKnown RBP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 PDAP1Q13442 181 aaKnown RBP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 CDO1Q16878 200 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 DUS1LQ6P1R4 473 aaKnown RBP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 ATG14Q6ZNE5 492 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 DEPDC4Q8N2C3 294 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 PCSK1NQ9UHG2 260 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 RPTORQ8N122 1335 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 M0QYV0 167 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 CCDC22O60826 627 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 TNFRSF21O75509 655 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 CCT3P49368 545 aaKnown RBP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 NUP107P57740 925 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 NCOA4Q13772 614 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 PIGHQ14442 188 aaPredicted RBP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 CLEC16AQ2KHT3 1053 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 CTAGE3PQ8IX95 158 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 LRRC20Q8TCA0 184 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 AKAP1Q92667 903 aaKnown RBP eCLIP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 LRRC19Q9H756 370 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 SLC24A2Q9UI40 661 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 CPSF3Q9UKF6 684 aaKnown RBP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 SPATA2Q9UM82 520 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 USP20Q9Y2K6 914 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 ZBED1O96006 694 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 ABHD2P08910 425 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 CYP11B1P15538 503 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 CACNB2Q08289 660 aaPredicted RBP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 GPS1Q13098 491 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 THOC5Q13769 683 aaKnown RBP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 TRIP10Q15642 601 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 TBCCQ15814 346 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 RNF43Q68DV7 783 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 ALDH16A1Q8IZ83 802 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 ABRAQ8N0Z2 381 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 GLIS3Q8NEA6 775 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 LRGUKQ96M69 825 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 CHID1Q9BWS9 393 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 SERHL2Q9H4I8 314 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 HAO1Q9UJM8 370 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 MTO1Q9Y2Z2 717 aaKnown RBP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 NEU2Q9Y3R4 380 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 CDY2AQ9Y6F7 541 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 ITGB4P16144 1822 aa10.18□□□□□ -0.78
SIN3A-201ENST00000360439 MYO5AQ9Y4I1 1855 aaKnown RBP10.18□□□□□ -0.78
SIN3A-201ENST00000360439 ALDH2P05091 517 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 THP07101 528 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 AKAP5P24588 427 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 VCPP55072 806 aaKnown RBP10.17□□□□□ -0.78
SIN3A-201ENST00000360439 OTUD4Q01804 1114 aaKnown RBP10.17□□□□□ -0.78
SIN3A-201ENST00000360439 AP1B1Q10567 949 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 ACAP2Q15057 778 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 ECM1Q16610 540 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 HIF1AQ16665 826 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 LDLRAD1Q5T700 205 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 BSPRYQ5W0U4 402 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 C1orf186Q6ZWK4 172 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 YAF2Q8IY57 180 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 AFAP1L2Q8N4X5 818 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 PPP1R36Q96LQ0 422 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 MBOAT7Q96N66 472 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 TRIM56Q9BRZ2 755 aaKnown RBP10.17□□□□□ -0.78
SIN3A-201ENST00000360439 RHOBTB2Q9BYZ6 727 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 OSBPL8Q9BZF1 889 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 OSBPL7Q9BZF2 842 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 RPRD1BQ9NQG5 326 aaKnown RBP10.17□□□□□ -0.78
SIN3A-201ENST00000360439 RPL26L1Q9UNX3 145 aaKnown RBP10.17□□□□□ -0.78
SIN3A-201ENST00000360439 SNED1Q8TER0 1413 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 IGKV6D-41A0A0C4DH26 115 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 SOWAHBA6NEL2 793 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 RAD51BO15315 384 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 IL18RAPO95256 599 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 SSTR3P32745 418 aaPredicted RBP10.17□□□□□ -0.78
SIN3A-201ENST00000360439 HSD17B4P51659 736 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 ARSEP51690 589 aa10.17□□□□□ -0.78
SIN3A-201ENST00000360439 PTPN5P54829 565 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms