RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PTDSS1P48651 473 aaKnown RBP15.16■□□□□ 0.02
CHD4-201ENST00000357008 TRAF3Q13114 568 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 CAMK1DQ8IU85 385 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 PIWIL2Q8TC59 973 aaKnown RBP15.16■□□□□ 0.02
CHD4-201ENST00000357008 SPPL2AQ8TCT8 520 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 TBC1D10AQ9BXI6 508 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 EMILIN2Q9BXX0 1053 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 LRMDAQ9H2I8 198 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 PXMP2Q9NR77 195 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 DSEQ9UL01 958 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 AK9Q5TCS8 1911 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 TCRBV5S4A2TA0A5A2 114 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 CYP1A1P04798 512 aaPredicted RBP15.16■□□□□ 0.02
CHD4-201ENST00000357008 MAGEA10P43363 369 aaPredicted RBP15.16■□□□□ 0.02
CHD4-201ENST00000357008 RPL14P50914 215 aaKnown RBP15.16■□□□□ 0.02
CHD4-201ENST00000357008 ITPK1Q13572 414 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 KCTD21Q4G0X4 260 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 TXNRD3Q86VQ6 643 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 TRPC4APQ8TEL6 797 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 COQ7Q99807 217 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 COLEC11Q9BWP8 271 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 NOL6Q9H6R4 1146 aaKnown RBP15.16■□□□□ 0.02
CHD4-201ENST00000357008 SPACA6W5XKT8 324 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 CNTNAP4Q9C0A0 1308 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 NUP62P37198 522 aaPredicted RBP15.16■□□□□ 0.02
CHD4-201ENST00000357008 OR56A4Q8NGH8 313 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 ACTRT2Q8TDY3 377 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 TRIM8Q9BZR9 551 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 FANCEQ9HB96 536 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 CXCL8P10145 99 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 CYP2B6P20813 491 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 EIF4BP23588 611 aaKnown RBP15.16■□□□□ 0.02
CHD4-201ENST00000357008 DPP10Q8N608 796 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 ZDHHC15Q96MV8 337 aa15.16■□□□□ 0.02
CHD4-201ENST00000357008 FRMPD4Q14CM0 1322 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 NPM3O75607 178 aaKnown RBP15.15■□□□□ 0.02
CHD4-201ENST00000357008 SLITRK3O94933 977 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 MFN2O95140 757 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 PAEPP09466 180 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 IL12RB1P42701 662 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 DRG2P55039 364 aaKnown RBP15.15■□□□□ 0.02
CHD4-201ENST00000357008 FBXO47Q5MNV8 452 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 SCARA3Q6AZY7 606 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 C10orf53Q8N6V4 93 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 FNIP1Q8TF40 1166 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 OMA1Q96E52 524 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 SMAD5Q99717 465 aaKnown RBP15.15■□□□□ 0.02
CHD4-201ENST00000357008 HDHD2Q9H0R4 259 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 WDR41Q9HAD4 459 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 A1CFQ9NQ94 594 aaKnown RBP15.15■□□□□ 0.02
CHD4-201ENST00000357008 PADI4Q9UM07 663 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 CPS1P31327 1500 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 PTGES3LE9PB15 166 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 SHBGP04278 402 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 ZNF470Q6ECI4 717 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 AGBL3Q8NEM8 1001 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 BHLHE22Q8NFJ8 381 aaPredicted RBP15.15■□□□□ 0.02
CHD4-201ENST00000357008 ITFG1Q8TB96 612 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 PDCD2LQ9BRP1 358 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 ITGB1BP2Q9UKP3 347 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 PTPRMP28827 1452 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 SYNCRIPO60506 623 aaKnown RBP15.15■□□□□ 0.02
CHD4-201ENST00000357008 SERPINF2P08697 491 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 RENBPP51606 427 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 EPS8Q12929 822 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 GNASQ5JWF2 1037 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 STYK1Q6J9G0 422 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 KRT73Q86Y46 540 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 CEP41Q9BYV8 373 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 TAS2R13Q9NYV9 303 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 RPL26L1Q9UNX3 145 aaKnown RBP15.15■□□□□ 0.02
CHD4-201ENST00000357008 BTNL10A8MVZ5 291 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 GPR182O15218 404 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 CD3EAPO15446 510 aaKnown RBP15.15■□□□□ 0.02
CHD4-201ENST00000357008 UPP2O95045 317 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 ANXA6P08133 673 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 HOXB8P17481 243 aaPredicted RBP15.15■□□□□ 0.02
CHD4-201ENST00000357008 ALOX12P18054 663 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 RPS12P25398 132 aaKnown RBP15.15■□□□□ 0.02
CHD4-201ENST00000357008 HK2P52789 917 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 ARMC6Q6NXE6 501 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 GJD4Q96KN9 370 aaPredicted RBP15.15■□□□□ 0.02
CHD4-201ENST00000357008 GINS4Q9BRT9 223 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 SEMA6AQ9H2E6 1030 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 RAD51BO15315 384 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 CCNT2O60583 730 aaKnown RBP15.15■□□□□ 0.02
CHD4-201ENST00000357008 VAPBO95292 243 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 ABHD2P08910 425 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 NUDT17P0C025 328 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 CCR1P32246 355 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 NDST1P52848 882 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 ITGA1P56199 1179 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 PPATQ06203 517 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 LAMTOR4Q0VGL1 99 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 NFIAQ12857 509 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 ADGRA1Q86SQ6 560 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 WDR36Q8NI36 951 aaKnown RBP15.15■□□□□ 0.02
CHD4-201ENST00000357008 RAET1EQ8TD07 263 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 MCM8Q9UJA3 840 aa15.15■□□□□ 0.02
CHD4-201ENST00000357008 H7C4K7 107 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms