RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 GHRP10912 638 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 VAV1P15498 845 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 DPEP1P16444 411 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 EPS8Q12929 822 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 GIT2Q14161 759 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 OASLQ15646 514 aaKnown RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 PAN2Q504Q3 1202 aaKnown RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 TCEAL5Q5H9L2 206 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 ARMC4Q5T2S8 1044 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 OVOS1Q6IE37 1185 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 CYB5D1Q6P9G0 228 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 AGMOQ6ZNB7 445 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 NIPA1Q7RTP0 329 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 NT5DC3Q86UY8 548 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 DHFR2Q86XF0 187 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 MIER2Q8N344 545 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 DNAJC1Q96KC8 554 aaKnown RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 UROC1Q96N76 676 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 IRX2Q9BZI1 471 aaPredicted RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 CYP4F12Q9HCS2 524 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 TCF7L2Q9NQB0 619 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 CISHQ9NSE2 258 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 MBD2Q9UBB5 411 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 CORO2BQ9UQ03 480 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 UMODL1Q5DID0 1318 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 SLC37A4O43826 429 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 OR6A2O95222 327 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 DSG3P32926 999 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 GLRBP48167 497 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 SLC1A6P48664 564 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 TUFMP49411 452 aaKnown RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 CORO7P57737 925 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 OVGP1Q12889 678 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 TOP3AQ13472 1001 aaPredicted RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 C2CD6Q53TS8 623 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 SPDYCQ5MJ68 293 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 MZT2AQ6P582 158 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 METTL3Q86U44 580 aaKnown RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 KCNMB4Q86W47 210 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 COMMD2Q86X83 199 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 TMEM86AQ8N2M4 240 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 RNASE11Q8TAA1 199 aaKnown RBP6.61□□□□□ -1.35
UPF2-201ENST00000356352 NKX2-3Q8TAU0 364 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 RXFP2Q8WXD0 754 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 PROX1Q92786 737 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 SHCBP1LQ9BZQ2 653 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 MYLK2Q9H1R3 596 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 EPB41L4BQ9H329 900 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 ASB7Q9H672 318 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 RXFP1Q9HBX9 757 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 HMG20AQ9NP66 347 aa6.61□□□□□ -1.35
UPF2-201ENST00000356352 RBM22Q9NW64 420 aaKnown RBP eCLIP6.61□□□□□ -1.35
UPF2-201ENST00000356352 LRRC14BA6NHZ5 514 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 F8VZ95 297 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 SLC9A3R1O14745 358 aaPredicted RBP6.6□□□□□ -1.35
UPF2-201ENST00000356352 KPNA5O15131 536 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 BAIAP3O94812 1187 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 CLPTM1O96005 669 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 WARSP23381 471 aaKnown RBP6.6□□□□□ -1.35
UPF2-201ENST00000356352 RPL3P39023 403 aaKnown RBP6.6□□□□□ -1.35
UPF2-201ENST00000356352 MAPK8P45983 427 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 ALDH9A1P49189 494 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 HNMTP50135 292 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 SCNN1BP51168 640 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 CLCN3P51790 818 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 IL2P60568 153 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 TGFB2P61812 414 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 LAMTOR4Q0VGL1 99 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 TAF13Q15543 124 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 TIMM50Q3ZCQ8 353 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 USP45Q70EL2 814 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 ABRAQ8N0Z2 381 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 CACTIN-AS1Q8N1I8 211 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 AADATQ8N5Z0 425 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 CAVIN3Q969G5 261 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 APOPT1Q96IL0 206 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 CPB2Q96IY4 423 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 CDC42EP4Q9H3Q1 356 aaKnown RBP6.6□□□□□ -1.35
UPF2-201ENST00000356352 ATAD3AQ9NVI7 634 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 SAE1Q9UBE0 346 aaPredicted RBP6.6□□□□□ -1.35
UPF2-201ENST00000356352 MANSC4A6NHS7 340 aaPredicted RBP6.6□□□□□ -1.35
UPF2-201ENST00000356352 KPNA4O00629 521 aaPredicted RBP6.6□□□□□ -1.35
UPF2-201ENST00000356352 MGRN1O60291 552 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 MED24O75448 989 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 ENO2P09104 434 aaPredicted RBP6.6□□□□□ -1.35
UPF2-201ENST00000356352 DGKAP23743 735 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 CYP2C18P33260 490 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 FLT3P36888 993 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 ACOX1Q15067 660 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 ZNHIT3Q15649 155 aaPredicted RBP6.6□□□□□ -1.35
UPF2-201ENST00000356352 DGUOKQ16854 277 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 AGKQ53H12 422 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 KCNT1Q5JUK3 1230 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 DGKKQ5KSL6 1271 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 LYPLAL1Q5VWZ2 237 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 PAPD7Q5XG87 772 aaKnown RBP6.6□□□□□ -1.35
UPF2-201ENST00000356352 SLC27A1Q6PCB7 646 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 GLT6D1Q7Z4J2 308 aa6.6□□□□□ -1.35
UPF2-201ENST00000356352 PTAR1Q7Z6K3 402 aaPredicted RBP6.6□□□□□ -1.35
UPF2-201ENST00000356352 LENG9Q96B70 501 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms