RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 HDCP19113 662 aa13.97□□□□□ -0.17
TRIM4-203ENST00000355947 MX2P20592 715 aa13.97□□□□□ -0.17
TRIM4-203ENST00000355947 ARRB2P32121 409 aa13.97□□□□□ -0.17
TRIM4-203ENST00000355947 CLCN3P51790 818 aa13.97□□□□□ -0.17
TRIM4-203ENST00000355947 SP2Q02086 613 aa13.97□□□□□ -0.17
TRIM4-203ENST00000355947 TMEM259Q4ZIN3 620 aa13.97□□□□□ -0.17
TRIM4-203ENST00000355947 MCUQ8NE86 351 aa13.97□□□□□ -0.17
TRIM4-203ENST00000355947 ATP6V1E2Q96A05 226 aa13.97□□□□□ -0.17
TRIM4-203ENST00000355947 WRNIP1Q96S55 665 aa13.97□□□□□ -0.17
TRIM4-203ENST00000355947 PKP2Q99959 881 aa13.97□□□□□ -0.17
TRIM4-203ENST00000355947 RPF1Q9H9Y2 349 aaKnown RBP13.97□□□□□ -0.17
TRIM4-203ENST00000355947 USP29Q9HBJ7 922 aa13.97□□□□□ -0.17
TRIM4-203ENST00000355947 CYP4F12Q9HCS2 524 aa13.97□□□□□ -0.17
TRIM4-203ENST00000355947 C9JVG2 144 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 DNAJA2O60884 412 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 GLRA3O75311 464 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 LTFP02788 710 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 NAGLUP54802 743 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 POU5F1BQ06416 359 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 SLC9A4Q6AI14 798 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 PACS1Q6VY07 963 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 ATG14Q6ZNE5 492 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 STRA8Q7Z7C7 330 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 ZBTB8OSQ8IWT0 167 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 PQLC3Q8N755 202 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 EXT2Q93063 718 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 AGAP2Q99490 1192 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 SERPINI1Q99574 410 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 CIB1Q99828 191 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 TMEM79Q9BSE2 394 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 SLC4A5Q9BY07 1137 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 MRPL4Q9BYD3 311 aaKnown RBP13.96□□□□□ -0.17
TRIM4-203ENST00000355947 DDX43Q9NXZ2 648 aaKnown RBP13.96□□□□□ -0.17
TRIM4-203ENST00000355947 TMEM233B4DJY2 109 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 CHADO15335 359 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 PSMC3P17980 439 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 FUT4P22083 530 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 CRHR1P34998 444 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 HPCAP84074 193 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 CDKL1Q00532 357 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 GEN1Q17RS7 908 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 MAP7D1Q3KQU3 841 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 MBLAC2Q68D91 279 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 CLVS1Q8IUQ0 354 aaPredicted RBP13.96□□□□□ -0.17
TRIM4-203ENST00000355947 KLHL23Q8NBE8 558 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 NTPCRQ9BSD7 190 aaKnown RBP13.96□□□□□ -0.17
TRIM4-203ENST00000355947 ELOVL4Q9GZR5 314 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 STK32BQ9NY57 414 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 TSPAN16Q9UKR8 245 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 SH3BP1Q9Y3L3 701 aa13.96□□□□□ -0.17
TRIM4-203ENST00000355947 SMIM31A0A1B0GVY4 71 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 ARHGEF37A1IGU5 675 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 XPOTO43592 962 aaKnown RBP13.96□□□□□ -0.18
TRIM4-203ENST00000355947 PTPN1P18031 435 aaKnown RBP13.96□□□□□ -0.18
TRIM4-203ENST00000355947 TSPAN8P19075 237 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 PTGER2P43116 358 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 PLK1P53350 603 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 NME3Q13232 169 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 PCLAFQ15004 111 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 RPS27LQ71UM5 84 aaKnown RBP13.96□□□□□ -0.18
TRIM4-203ENST00000355947 UTS2BQ765I0 119 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 IFNEQ86WN2 208 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 BRSK2Q8IWQ3 736 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 CPNE9Q8IYJ1 553 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 ZNF786Q8N393 782 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 COLGALT1Q8NBJ5 622 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 CLEC4CQ8WTT0 213 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 SDCBP2Q9H190 292 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 SYBUQ9NX95 663 aa13.96□□□□□ -0.18
TRIM4-203ENST00000355947 KLHL8Q9P2G9 620 aaPredicted RBP13.96□□□□□ -0.18
TRIM4-203ENST00000355947 SF3B1O75533 1304 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRIM4-203ENST00000355947 ARHGAP10A1A4S6 786 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 TK2O00142 265 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 HCRTO43612 131 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 AOC1P19801 751 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 PIK3R1P27986 724 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 PLOD1Q02809 727 aaPredicted RBP13.95□□□□□ -0.18
TRIM4-203ENST00000355947 ATP1A4Q13733 1029 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 GOLGA7BQ2TAP0 167 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 LRRC8EQ6NSJ5 796 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 AAGABQ6PD74 315 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 UGT2A3Q6UWM9 527 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 VSIG10LQ86VR7 867 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 DSELQ8IZU8 1212 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 KYQ8NBH2 561 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 USP33Q8TEY7 942 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 SREK1Q8WXA9 508 aaKnown RBP13.95□□□□□ -0.18
TRIM4-203ENST00000355947 CPB2Q96IY4 423 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 CNPY3Q9BT09 278 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 PHF24Q9UPV7 400 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 A0A0J9YVX5 310 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 VILLO15195 856 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 PIGNO95427 931 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 SUPT20HL2P0C7V6 817 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 PSMB4P28070 264 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 NDST1P52848 882 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 STILQ15468 1287 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 SUPT20HL1Q3ZLR7 823 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 MTX3Q5HYI7 312 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 GLRA4Q5JXX5 417 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms