RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 POU5F2Q8N7G0 328 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 GOT1P17174 413 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 ROR2Q01974 943 aaKnown RBP25.21■■□□□ 1.63
CPNE1-202ENST00000352393 DHDDSQ86SQ9 333 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 MFN1Q8IWA4 741 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 COLGALT1Q8NBJ5 622 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 PPP4R1Q8TF05 950 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 ZFAND2BQ8WV99 257 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 FAM192AQ9GZU8 254 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 PDGFCQ9NRA1 345 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 PNPOQ9NVS9 261 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 IRF6O14896 467 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 GRM5P41594 1212 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 SESN2P58004 480 aaPredicted RBP25.21■■□□□ 1.63
CPNE1-202ENST00000352393 RALGPS1Q5JS13 557 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 LGMNQ99538 433 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 LPIN3Q9BQK8 851 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 CXCL16Q9H2A7 254 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 ZDHHC7Q9NXF8 308 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 COPG2Q9UBF2 871 aa25.21■■□□□ 1.63
CPNE1-202ENST00000352393 ZNF638Q14966 1978 aaKnown RBP25.2■■□□□ 1.63
CPNE1-202ENST00000352393 ARHGAP42A6NI28 874 aa25.2■■□□□ 1.62
CPNE1-202ENST00000352393 MFSD11O43934 449 aa25.2■■□□□ 1.62
CPNE1-202ENST00000352393 HARS2P49590 506 aaKnown RBP25.2■■□□□ 1.62
CPNE1-202ENST00000352393 CCNIQ14094 377 aa25.2■■□□□ 1.62
CPNE1-202ENST00000352393 PYROXD2Q8N2H3 581 aa25.2■■□□□ 1.62
CPNE1-202ENST00000352393 ACTRT2Q8TDY3 377 aa25.2■■□□□ 1.62
CPNE1-202ENST00000352393 PPP2R3CQ969Q6 453 aa25.2■■□□□ 1.62
CPNE1-202ENST00000352393 NAT9Q9BTE0 207 aa25.2■■□□□ 1.62
CPNE1-202ENST00000352393 CCDC28BQ9BUN5 200 aa25.2■■□□□ 1.62
CPNE1-202ENST00000352393 RNF103O00237 685 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 OPHN1O60890 802 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 RPL34P49207 117 aaKnown RBP25.19■■□□□ 1.62
CPNE1-202ENST00000352393 RNF111Q6ZNA4 994 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 OR6Y1Q8NGX8 325 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 DPEP3Q9H4B8 488 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 PIH1D1Q9NWS0 290 aaKnown RBP25.19■■□□□ 1.62
CPNE1-202ENST00000352393 SYBUQ9NX95 663 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 TMEM216Q9P0N5 145 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 RCOR3Q9P2K3 495 aaPredicted RBP25.19■■□□□ 1.62
CPNE1-202ENST00000352393 SCN4AP35499 1836 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 LGALS2P05162 132 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 CYP2C8P10632 490 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 ABCE1P61221 599 aaKnown RBP25.19■■□□□ 1.62
CPNE1-202ENST00000352393 TTLL4Q14679 1199 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 PDPK2PQ6A1A2 396 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 PAXIP1Q6ZW49 1069 aaPredicted RBP25.19■■□□□ 1.62
CPNE1-202ENST00000352393 UNC93AQ86WB7 457 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 RASSF3Q86WH2 238 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 TUBGCP5Q96RT8 1024 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 TXNRD2Q9NNW7 524 aa25.19■■□□□ 1.62
CPNE1-202ENST00000352393 MAGEA12P43365 314 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 ARHGAP1Q07960 439 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 BST2Q10589 180 aaKnown RBP25.18■■□□□ 1.62
CPNE1-202ENST00000352393 PPM1JQ5JR12 505 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 STRADAQ7RTN6 431 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 RSPH3Q86UC2 560 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 PDSS2Q86YH6 399 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 PYDC1Q8WXC3 89 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 JADE3Q92613 823 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 SF3B1O75533 1304 aaKnown RBP eCLIP25.18■■□□□ 1.622e-6■■■■■ 85.9
CPNE1-202ENST00000352393 ZBTB7AO95365 584 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 RALBP11234 206 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 ARL4AP40617 200 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 DEUP1Q05D60 604 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 ISL2Q96A47 359 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 DDX50Q9BQ39 737 aaKnown RBP25.18■■□□□ 1.62
CPNE1-202ENST00000352393 CDH22Q9UJ99 828 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 FZD10Q9ULW2 581 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 DERAQ9Y315 318 aa25.18■■□□□ 1.62
CPNE1-202ENST00000352393 A0A0G2JLL6 359 aaPredicted RBP25.17■■□□□ 1.62
CPNE1-202ENST00000352393 ADCY6O43306 1168 aa25.17■■□□□ 1.62
CPNE1-202ENST00000352393 STK10O94804 968 aaKnown RBP25.17■■□□□ 1.62
CPNE1-202ENST00000352393 GP5P40197 560 aa25.17■■□□□ 1.62
CPNE1-202ENST00000352393 BCAT1P54687 386 aa25.17■■□□□ 1.62
CPNE1-202ENST00000352393 KCTD2Q14681 263 aa25.17■■□□□ 1.62
CPNE1-202ENST00000352393 ACAD11Q709F0 780 aa25.17■■□□□ 1.62
CPNE1-202ENST00000352393 PRRT2Q7Z6L0 340 aaPredicted RBP25.17■■□□□ 1.62
CPNE1-202ENST00000352393 NLRP7Q8WX94 980 aa25.17■■□□□ 1.62
CPNE1-202ENST00000352393 P2RY11Q96G91 374 aa25.17■■□□□ 1.62
CPNE1-202ENST00000352393 ZMAT2Q96NC0 199 aaKnown RBP25.17■■□□□ 1.62
CPNE1-202ENST00000352393 GBP5Q96PP8 586 aa25.17■■□□□ 1.62
CPNE1-202ENST00000352393 EBF3Q9H4W6 596 aa25.17■■□□□ 1.62
CPNE1-202ENST00000352393 HCRTO43612 131 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 ZCCHC18P0CG32 403 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 LCP1P13796 627 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 CCDC130P13994 396 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 ITGAXP20702 1163 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 PSMB4P28070 264 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 GLUD2P49448 558 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 EPHB1P54762 984 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 ANKRD52Q8NB46 1076 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 OR6B3Q8NGW1 331 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 CMTM5Q96DZ9 223 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 PRDM16Q9HAZ2 1276 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.16■■□□□ 1.62
CPNE1-202ENST00000352393 GPRC5DQ9NZD1 345 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 TUBGCP4Q9UGJ1 667 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 COL1A2P08123 1366 aa25.16■■□□□ 1.62
CPNE1-202ENST00000352393 RNASEH1O60930 286 aaKnown RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms