RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 TPP2P29144 1249 aaPredicted RBP12.48□□□□□ -0.41
SMAD9-201ENST00000350148 RGS4P49798 205 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 PRKAA2P54646 552 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 ESRRGP62508 458 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 PDAP1Q13442 181 aaKnown RBP12.48□□□□□ -0.41
SMAD9-201ENST00000350148 KCNT2Q6UVM3 1135 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 ARL10Q8N8L6 244 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 EDEM1Q92611 657 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 LRGUKQ96M69 825 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 ADGRE3Q9BY15 652 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 BCO2Q9BYV7 579 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 SLC25A13Q9UJS0 675 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 TRIM49D1C9J1S8 452 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 CCDC159P0C7I6 412 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 ATP5C1P36542 298 aaKnown RBP12.48□□□□□ -0.41
SMAD9-201ENST00000350148 PURAQ00577 322 aaKnown RBP12.48□□□□□ -0.41
SMAD9-201ENST00000350148 SFSWAPQ12872 951 aaKnown RBP12.48□□□□□ -0.41
SMAD9-201ENST00000350148 ELMO2Q96JJ3 720 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 COMMD8Q9NX08 183 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 UBA6A0AVT1 1052 aaPredicted RBP12.48□□□□□ -0.41
SMAD9-201ENST00000350148 INHAP05111 366 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 MYL2P10916 166 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 ACLYP53396 1101 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 ART3Q13508 389 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 DRICH1Q6PGQ1 229 aaPredicted RBP12.48□□□□□ -0.41
SMAD9-201ENST00000350148 TMC7Q7Z402 723 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 UCMAQ8WVF2 138 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 TRIM15Q9C019 465 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 PDLIM7Q9NR12 457 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 MARCH2Q9P0N8 246 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 SUN2Q9UH99 717 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 NCF2P19878 526 aaPredicted RBP12.48□□□□□ -0.41
SMAD9-201ENST00000350148 SERPINB4P48594 390 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 ARHGEF7Q14155 803 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 TBCCQ15814 346 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 GRTP1Q5TC63 336 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 ZNF516Q92618 1163 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 LPPQ93052 612 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 SLC9A7Q96T83 725 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 PAFAH2Q99487 392 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 NINJ2Q9NZG7 142 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 DNMT3LQ9UJW3 386 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 CDY1Q9Y6F8 540 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 KDM1AO60341 852 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 SNUPNO95149 360 aaKnown RBP12.48□□□□□ -0.41
SMAD9-201ENST00000350148 NUDT17P0C025 328 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 CES1P23141 567 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 MFN1Q8IWA4 741 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 DACT3Q96B18 629 aaPredicted RBP12.48□□□□□ -0.41
SMAD9-201ENST00000350148 SCUBE2Q9NQ36 999 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 RBM22Q9NW64 420 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMAD9-201ENST00000350148 VANGL2Q9ULK5 521 aa12.48□□□□□ -0.41
SMAD9-201ENST00000350148 RNF103O00237 685 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 NEMP1O14524 444 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 MPOP05164 745 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 CKMP06732 381 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 PECAM1P16284 738 aaPredicted RBP12.47□□□□□ -0.41
SMAD9-201ENST00000350148 LILRA4P59901 499 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 RPL7AP62424 266 aaKnown RBP12.47□□□□□ -0.41
SMAD9-201ENST00000350148 LRRC14Q15048 493 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 CRYBG2Q8N1P7 616 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 NKD2Q969F2 451 aaPredicted RBP12.47□□□□□ -0.41
SMAD9-201ENST00000350148 HIPK3Q9H422 1215 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 DDX5P17844 614 aaKnown RBP12.47□□□□□ -0.41
SMAD9-201ENST00000350148 CDC25CP30307 473 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 FAM83EQ2M2I3 478 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 HECTD3Q5T447 861 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 GFM2Q969S9 779 aaKnown RBP12.47□□□□□ -0.41
SMAD9-201ENST00000350148 GDAP2Q9NXN4 497 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 GTSE1Q9NYZ3 720 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 FNDC3AQ9Y2H6 1198 aaKnown RBP12.47□□□□□ -0.41
SMAD9-201ENST00000350148 ZNF510Q9Y2H8 683 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 STX7O15400 261 aaKnown RBP12.47□□□□□ -0.41
SMAD9-201ENST00000350148 TAS2R40P59535 323 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 C15orf59Q2T9L4 293 aaPredicted RBP12.47□□□□□ -0.41
SMAD9-201ENST00000350148 PREPLQ4J6C6 727 aaPredicted RBP12.47□□□□□ -0.41
SMAD9-201ENST00000350148 DLK2Q6UY11 383 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 FUBP3Q96I24 572 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMAD9-201ENST00000350148 FAR2Q96K12 515 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 PCMTD2Q9NV79 361 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 ETNK2Q9NVF9 386 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 TMEM161AQ9NX61 479 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 OR12D3Q9UGF7 316 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 PTPRJQ12913 1337 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 SERPINF2P08697 491 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 C16orf87Q6PH81 154 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 LVRNQ6Q4G3 990 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 NPAS4Q8IUM7 802 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 HDAC7Q8WUI4 952 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 CPXM1Q96SM3 734 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 C16orf70Q9BSU1 422 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 TTPALQ9BTX7 342 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 GPR63Q9BZJ6 419 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 SEMA4AQ9H3S1 761 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 KIAA1551Q9HCM1 1747 aa12.47□□□□□ -0.41
SMAD9-201ENST00000350148 PMPCBO75439 489 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 GJB6O95452 261 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 GTF2H3Q13889 308 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 ITIH4Q14624 930 aa12.46□□□□□ -0.41
SMAD9-201ENST00000350148 PCSK7Q16549 785 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms