RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 KANK2Q63ZY3 851 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 LRRC74BQ6ZQY2 392 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 CXXC5Q7LFL8 322 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 ECHDC2Q86YB7 292 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 KRTAP1-3Q8IUG1 177 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 ARHGAP24Q8N264 748 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 GUF1Q8N442 669 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 AFAP1L2Q8N4X5 818 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 STPG3Q8N7X2 389 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 C4orf32Q8N8J7 132 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 ZBTB8BQ8NAP8 495 aaPredicted RBP8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 CHTF18Q8WVB6 975 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 UCMAQ8WVF2 138 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 RSPH1Q8WYR4 309 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 PPP2R3CQ969Q6 453 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 MBD6Q96DN6 1003 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 ELF4Q99607 663 aaPredicted RBP8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 TRIM51Q9BSJ1 452 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 LSM14BQ9BX40 385 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 BTBD2Q9BX70 525 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 VPS33BQ9H267 617 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 TMEM60Q9H2L4 133 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 CAAP1Q9H8G2 361 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 SH3GLB2Q9NR46 395 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 H2AFY2Q9P0M6 372 aaPredicted RBP8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 ARHGAP28Q9P2N2 729 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 ABCF2Q9UG63 623 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 PAIP2BQ9ULR5 123 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 PACSIN2Q9UNF0 486 aaPredicted RBP8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 SLC4A4Q9Y6R1 1079 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 ADAMTSL1Q8N6G6 1762 aa8.05□□□□□ -1.12
UBE2D3-204ENST00000349311 GAKO14976 1311 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 UMODL1Q5DID0 1318 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 TMEM120BA0PK00 339 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 SMIM23A6NLE4 172 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 DDX3XO00571 662 aaKnown RBP eCLIP8.04□□□□□ -1.122e-17■■■■□ 23.8
UBE2D3-204ENST00000349311 KIAA0391O15091 583 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 BIRC5O15392 142 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 RIPK2O43353 540 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 E2F6O75461 281 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 KRT37O76014 449 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 TTLL1O95922 423 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 H2AFZP0C0S5 128 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 CPA3P15088 417 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 PTX3P26022 381 aaPredicted RBP8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 CHRNA3P32297 505 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 ADCYAP1R1P41586 468 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 CDK7P50613 346 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 RPL26P61254 145 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 TGFB2P61812 414 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 SMAD3P84022 425 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 MECOMQ03112 1051 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 SLC29A2Q14542 456 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 SBK1Q52WX2 424 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 ESRP1Q6NXG1 681 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 DPP8Q6V1X1 898 aaPredicted RBP8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 PIK3AP1Q6ZUJ8 805 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 H2AFVQ71UI9 128 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 MARK2Q7KZI7 788 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 MAEAQ7L5Y9 396 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 PHLDB2Q86SQ0 1253 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 ZNF554Q86TJ5 538 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 EXOC3L1Q86VI1 746 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 LCORLQ8N3X6 602 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 SRBD1Q8N5C6 995 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 SMYD1Q8NB12 490 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 TXNDC5Q8NBS9 432 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 SUPT20HQ8NEM7 779 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 ZNF398Q8TD17 642 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 C17orf50Q8WW18 174 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 ESR2Q92731 530 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 ARHGEF2Q92974 986 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 STMN2Q93045 179 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 HAUS1Q96CS2 278 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 HES6Q96HZ4 224 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 LRRC37BQ96QE4 947 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 MPHOSPH6Q99547 160 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 ZNF184Q99676 751 aaPredicted RBP8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 SLX1AQ9BQ83 275 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 SPATA25Q9BR10 227 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 MRIQ9BWK5 157 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 TBC1D10AQ9BXI6 508 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 TRIM9Q9C026 710 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 XYLT2Q9H1B5 865 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 DHX36Q9H2U1 1008 aaKnown RBP8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 SYNCQ9H7C4 482 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 ARMT1Q9H993 441 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 KCNK9Q9NPC2 374 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 TCP11L1Q9NUJ3 509 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 TBCCD1Q9NVR7 557 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 CROTQ9UKG9 612 aa8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 ZMYND8Q9ULU4 1186 aaPredicted RBP8.04□□□□□ -1.12
UBE2D3-204ENST00000349311 NCANO14594 1321 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 ADGRA3Q8IWK6 1321 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 RPTORQ8N122 1335 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 SIPA1L1O43166 1804 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 MYH11P35749 1972 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 ROBO3Q96MS0 1386 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 A0A087X0T9 212 aa8.03□□□□□ -1.12
UBE2D3-204ENST00000349311 TMEM221A6NGB7 291 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms