RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 HIPK3Q9H422 1215 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 CYLDQ9NQC7 956 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 NDC80O14777 642 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 KLHL38Q2WGJ6 581 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 LIMS2Q7Z4I7 341 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 DCP1BQ8IZD4 617 aaKnown RBP17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 FBXW11Q9UKB1 542 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 A0A0A0MRY4 1105 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 MYO1CO00159 1063 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 ENPP3O14638 875 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 NR2C2P49116 596 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 SARNPP82979 210 aaKnown RBP17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 C10orf120Q5SQS8 335 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 SRLQ86TD4 932 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 ZNF567Q8N184 647 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 ATXN2LQ8WWM7 1075 aaKnown RBP17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 FBXO32Q969P5 355 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 SPATA13Q96N96 652 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 SLC2A13Q96QE2 648 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 TMEM109Q9BVC6 243 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 GMIPQ9P107 970 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 ADAM28Q9UKQ2 775 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 NUP205Q92621 2012 aa17.67■□□□□ 0.42
SMARCC2-202ENST00000347471 TRIM49D1C9J1S8 452 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 USP46P62068 366 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 MICALCLQ6ZW33 695 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 QKIQ96PU8 341 aaKnown RBP eCLIP17.66■□□□□ 0.422e-22■■□□□ 13.6
SMARCC2-202ENST00000347471 TXNDC16Q9P2K2 825 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 ARHGEF37A1IGU5 675 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 CXorf49A8MYA2 514 aaPredicted RBP17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 HHLA1C9JL84 531 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 CHADO15335 359 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 PAGE1O75459 146 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 LVRNQ6Q4G3 990 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 ARHGAP36Q6ZRI8 547 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 RPAINQ86UA6 219 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 TRABD2AQ86V40 505 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 OR52K1Q8NGK4 314 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 FCRL2Q96LA5 508 aaPredicted RBP17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 NSRP1Q9H0G5 558 aaKnown RBP17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 GCAP28676 217 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 FAM133BQ5BKY9 247 aaKnown RBP17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 CAND1Q86VP6 1230 aaKnown RBP17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 PXYLP1Q8TE99 480 aa17.66■□□□□ 0.42
SMARCC2-202ENST00000347471 SLC11A1P49279 550 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 IL9RQ01113 521 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 COLGALT2Q8IYK4 626 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 CCDC197Q8NCU1 140 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 SLCO1B3Q9NPD5 702 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 F9P00740 461 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 TUBP50607 506 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 AGGF1Q8N302 714 aaeCLIP17.65■□□□□ 0.425e-7■■□□□ 13
SMARCC2-202ENST00000347471 TET1Q8NFU7 2136 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 PCDHB5Q9Y5E4 795 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 CDY1Q9Y6F8 540 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 CCDC195A0A1B0GUA6 201 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 EOMESO95936 686 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 PYGBP11216 843 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 PCSK7Q16549 785 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 ZNF280DQ6N043 979 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 FAM171BQ6P995 826 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 ANKS4BQ8N8V4 417 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 BHMTQ93088 406 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 UROC1Q96N76 676 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 ACSS3Q9H6R3 686 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 KANSL3Q9P2N6 904 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 PCDHB8Q9UN66 801 aa17.65■□□□□ 0.42
SMARCC2-202ENST00000347471 M0QZQ0 153 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 ZBTB24O43167 697 aaPredicted RBP17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 ADRA1DP25100 572 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 CCR1P32246 355 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 ALDH7A1P49419 539 aaKnown RBP17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 PSMD5Q16401 504 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 UNC5AQ6ZN44 842 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 OTOP3Q7RTS5 596 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 TAS1R1Q7RTX1 841 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 LRRC6Q86X45 466 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 CIR1Q86X95 450 aaPredicted RBP17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 MAML1Q92585 1016 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 PABPC5Q96DU9 382 aaKnown RBP17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 STAMBPL1Q96FJ0 436 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 TMEM161AQ9NX61 479 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 ABHD2P08910 425 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 DRD4P21917 467 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 SCNN1AP37088 669 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 TLE2Q04725 743 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 SLC1A5Q15758 541 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 IPMKQ8NFU5 416 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 LRRC8CQ8TDW0 803 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 ARHGAP42A6NI28 874 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 PMPCBO75439 489 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 NFKB1P19838 968 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 FAM111AQ96PZ2 611 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 PITPNM3Q9BZ71 974 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 PCMTD2Q9NV79 361 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 RPS6KL1Q9Y6S9 549 aa17.64■□□□□ 0.41
SMARCC2-202ENST00000347471 LPXNO60711 386 aa17.63■□□□□ 0.41
SMARCC2-202ENST00000347471 OVGP1Q12889 678 aa17.63■□□□□ 0.41
SMARCC2-202ENST00000347471 TAF10Q12962 218 aa17.63■□□□□ 0.41
SMARCC2-202ENST00000347471 NFE2Q16621 373 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms