RNA–Protein interactions for RNA: ENST00000344229.7

RNF13-201, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-201ENST00000344229 SPATA13Q96N96 652 aa13.09□□□□□ -0.31
RNF13-201ENST00000344229 FAM111AQ96PZ2 611 aa13.09□□□□□ -0.31
RNF13-201ENST00000344229 MYLK2Q9H1R3 596 aa13.09□□□□□ -0.31
RNF13-201ENST00000344229 CHST12Q9NRB3 414 aa13.09□□□□□ -0.31
RNF13-201ENST00000344229 CHKBQ9Y259 395 aa13.09□□□□□ -0.31
RNF13-201ENST00000344229 NUMBLQ9Y6R0 609 aa13.09□□□□□ -0.31
RNF13-201ENST00000344229 COL4A4P53420 1690 aaPredicted RBP13.08□□□□□ -0.31
RNF13-201ENST00000344229 PATJQ8NI35 1801 aa13.08□□□□□ -0.31
RNF13-201ENST00000344229 HACD1B0YJ81 288 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 RNF103O00237 685 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 DCLK1O15075 740 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 TOMM70O94826 608 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 POMCP01189 267 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 CD52P31358 61 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 LHX1P48742 406 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 ELF3P78545 371 aaPredicted RBP13.08□□□□□ -0.32
RNF13-201ENST00000344229 BMPR2Q13873 1038 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 PDCD2Q16342 344 aaPredicted RBP13.08□□□□□ -0.32
RNF13-201ENST00000344229 TTC39BQ5VTQ0 682 aaPredicted RBP13.08□□□□□ -0.32
RNF13-201ENST00000344229 RFX8Q6ZV50 586 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 TBC1D1Q86TI0 1168 aaPredicted RBP13.08□□□□□ -0.32
RNF13-201ENST00000344229 PDCD7Q8N8D1 485 aaKnown RBP13.08□□□□□ -0.32
RNF13-201ENST00000344229 C10orf82Q8WW14 230 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 ALKBH8Q96BT7 664 aaKnown RBP13.08□□□□□ -0.32
RNF13-201ENST00000344229 YIPF3Q9GZM5 350 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 UPF3AQ9H1J1 476 aaKnown RBP13.08□□□□□ -0.32
RNF13-201ENST00000344229 BATF3Q9NR55 127 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 STAP1Q9ULZ2 295 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 SNX10Q9Y5X0 201 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 H3BRJ5 948 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 EEF2KO00418 725 aaKnown RBP13.08□□□□□ -0.32
RNF13-201ENST00000344229 KPNA6O60684 536 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 SMNDC1O75940 238 aaKnown RBP eCLIP13.08□□□□□ -0.32
RNF13-201ENST00000344229 ADRA1BP35368 520 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 PAFAH1B3Q15102 231 aaKnown RBP13.08□□□□□ -0.32
RNF13-201ENST00000344229 MRPL10Q7Z7H8 261 aaKnown RBP13.08□□□□□ -0.32
RNF13-201ENST00000344229 TMEM86AQ8N2M4 240 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 EDEM1Q92611 657 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 LRRC39Q96DD0 335 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 PRDM12Q9H4Q4 367 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 SLC17A6Q9P2U8 582 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 PADI3Q9ULW8 664 aa13.08□□□□□ -0.32
RNF13-201ENST00000344229 WDR27A2RRH5 827 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 FAM159BA6NKW6 160 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 RFPL1O75677 317 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 ALADP13716 330 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 THPOP40225 353 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 GLUD2P49448 558 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 OVGP1Q12889 678 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 SEMA3BQ13214 749 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 OLIG2Q13516 323 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 KIF2BQ8N4N8 673 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 GSDMBQ8TAX9 411 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 HASPINQ8TF76 798 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 TBC1D31Q96DN5 1066 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 PGLYRP2Q96PD5 576 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 VPS11Q9H270 941 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 MANSC1Q9H8J5 431 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 TMLHEQ9NVH6 421 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 SEPT10Q9P0V9 454 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 KANSL3Q9P2N6 904 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 ZNF180Q9UJW8 692 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 GIT1Q9Y2X7 761 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 PCDHA11Q9Y5I1 949 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 F8W810 466 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 CAPN9O14815 690 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 MGRN1O60291 552 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 ADAMTS4O75173 837 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 NCAM1P13591 858 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 PSMB4P28070 264 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 BRCC3P46736 316 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 SEPT7Q16181 437 aaKnown RBP13.07□□□□□ -0.32
RNF13-201ENST00000344229 ZNF567Q8N184 647 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 CCNYQ8ND76 341 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 TMEM209Q96SK2 561 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 GORASP1Q9BQQ3 440 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 MOCS1Q9NZB8 636 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 LMCD1Q9NZU5 365 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 CDH9Q9ULB4 789 aa13.07□□□□□ -0.32
RNF13-201ENST00000344229 CAPN15O75808 1086 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 ASGR1P07306 291 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 ERCC2P18074 760 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 FLT3LGP49771 235 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 CCDC15Q0P6D6 951 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 ASRGL1Q7L266 308 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 RSPH3Q86UC2 560 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 NPWQ8N729 165 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 RFWD2Q8NHY2 731 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 ARNTL2Q8WYA1 636 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 MYLPFQ96A32 169 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 SRPK1Q96SB4 655 aaKnown RBP13.06□□□□□ -0.32
RNF13-201ENST00000344229 XAB2Q9HCS7 855 aaKnown RBP13.06□□□□□ -0.32
RNF13-201ENST00000344229 NPHS2Q9NP85 383 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 CNGB3Q9NQW8 809 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 FBXW11Q9UKB1 542 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 C9IYK1 514 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 FBXO21O94952 628 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 ITGB1P05556 798 aa13.06□□□□□ -0.32
RNF13-201ENST00000344229 SNRPAP09012 282 aaKnown RBP13.06□□□□□ -0.32
RNF13-201ENST00000344229 CCND3P30281 292 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms