RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 CNGA3Q16281 694 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 PDCD2Q16342 344 aaPredicted RBP16.58■□□□□ 0.24
SCARB1-202ENST00000339570 LRRC23Q53EV4 343 aaPredicted RBP16.58■□□□□ 0.24
SCARB1-202ENST00000339570 TREML2Q5T2D2 321 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 PID1Q7Z2X4 250 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 PDSS2Q86YH6 399 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 PNPLA1Q8N8W4 532 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 CDRT15Q96T59 188 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 A0A1B0GTW7 788 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 HNRNPRO43390 633 aaKnown RBP16.57■□□□□ 0.24
SCARB1-202ENST00000339570 PRKCHP24723 683 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 CRABP2P29373 138 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 NRF1Q16656 503 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 HSP90AA5PQ58FG0 334 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 C6orf52Q5T4I8 152 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 NAPRTQ6XQN6 538 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 RBM44Q6ZP01 1051 aaKnown RBP16.57■□□□□ 0.24
SCARB1-202ENST00000339570 GADL1Q6ZQY3 521 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 ARHGAP22Q7Z5H3 698 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 TTC30AQ86WT1 665 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 ACVR1CQ8NER5 493 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 OR52K1Q8NGK4 314 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 CEP70Q8NHQ1 597 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 ABTB1Q969K4 478 aaPredicted RBP16.57■□□□□ 0.24
SCARB1-202ENST00000339570 PRPF18Q99633 342 aaKnown RBP16.57■□□□□ 0.24
SCARB1-202ENST00000339570 LHX5Q9H2C1 402 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 MAP3K20Q9NYL2 800 aaKnown RBP16.57■□□□□ 0.24
SCARB1-202ENST00000339570 PCDHA11Q9Y5I1 949 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 EVPLQ92817 2033 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 SNNO75324 88 aaPredicted RBP16.57■□□□□ 0.24
SCARB1-202ENST00000339570 LTFP02788 710 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 VAV1P15498 845 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 MPSTP25325 297 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 WASHC5Q12768 1159 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 PDK1Q15118 436 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 CDKL2Q92772 493 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 COL4A5P29400 1685 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 C15orf38-AP3S2A0A0A6YYH1 394 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 CSPG5O95196 566 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 CPA3P15088 417 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 TNFAIP1Q13829 316 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 ARPINQ7Z6K5 226 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 FNIP1Q8TF40 1166 aa16.57■□□□□ 0.24
SCARB1-202ENST00000339570 HEMK1Q9Y5R4 338 aaPredicted RBP16.57■□□□□ 0.24
SCARB1-202ENST00000339570 KLF11O14901 512 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 PHGDHO43175 533 aaKnown RBP16.56■□□□□ 0.24
SCARB1-202ENST00000339570 COX4I1P13073 169 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 UQCRBP14927 111 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 AP3M2P53677 418 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 EN1Q05925 392 aaPredicted RBP16.56■□□□□ 0.24
SCARB1-202ENST00000339570 FAM43BQ6ZT52 329 aaPredicted RBP16.56■□□□□ 0.24
SCARB1-202ENST00000339570 CTU1Q7Z7A3 348 aaKnown RBP16.56■□□□□ 0.24
SCARB1-202ENST00000339570 STRA8Q7Z7C7 330 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 CCNYL1Q8N7R7 359 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 REPS2Q8NFH8 660 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.56■□□□□ 0.24
SCARB1-202ENST00000339570 NR1H4Q96RI1 486 aaPredicted RBP16.56■□□□□ 0.24
SCARB1-202ENST00000339570 NT5C1AQ9BXI3 368 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 PDGFCQ9NRA1 345 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 HESX1Q9UBX0 185 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 SSX2IPQ9Y2D8 614 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 CITO14578 2027 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 FAM159BA6NKW6 160 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 BAG6P46379 1132 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 GMPSP49915 693 aaPredicted RBP16.56■□□□□ 0.24
SCARB1-202ENST00000339570 TMEM132DQ14C87 1099 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 IER5Q5VY09 327 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 XRRA1Q6P2D8 792 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 LAYNQ6UX15 382 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 DCLK2Q8N568 766 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 NLRP7Q8WX94 980 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 SORT1Q99523 831 aa16.56■□□□□ 0.24
SCARB1-202ENST00000339570 RNF103O00237 685 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 FKBP6O75344 327 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 GSRP00390 522 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 SERPINE1P05121 402 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 ALDH1A3P47895 512 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 ABCE1P61221 599 aaKnown RBP16.55■□□□□ 0.24
SCARB1-202ENST00000339570 TUBB3Q13509 450 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 ZNF460Q14592 562 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 TLR1Q15399 786 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 SLC5A9Q2M3M2 681 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 CMPK2Q5EBM0 449 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 CDKL3Q8IVW4 592 aaPredicted RBP16.55■□□□□ 0.24
SCARB1-202ENST00000339570 HIC2Q96JB3 615 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 LRGUKQ96M69 825 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 OMDQ99983 421 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 VCX3BQ9H321 246 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 VCX3AQ9NNX9 186 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 DTLQ9NZJ0 730 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 SLC39A10Q9ULF5 831 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 PPME1Q9Y570 386 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 MFSD11O43934 449 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 KLHL2O95198 593 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 VDRP11473 427 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 GABRB2P47870 512 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 TAZQ16635 292 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 SOWAHAQ2M3V2 549 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 BOLA3Q53S33 107 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 RTKN2Q8IZC4 609 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms