RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 PACS1Q6VY07 963 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 KRT27Q7Z3Y8 459 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 TMC7Q7Z402 723 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 MYLK4Q86YV6 388 aaPredicted RBP12.77□□□□□ -0.37
RIOK3-201ENST00000339486 ZNF280CQ8ND82 737 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 IPMKQ8NFU5 416 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 NRG4Q8WWG1 115 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 LENG8Q96PV6 779 aaPredicted RBP12.77□□□□□ -0.37
RIOK3-201ENST00000339486 QTRT2Q9H974 415 aaKnown RBP12.77□□□□□ -0.37
RIOK3-201ENST00000339486 RRN3Q9NYV6 651 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.77□□□□□ -0.37
RIOK3-201ENST00000339486 ARHGAP28Q9P2N2 729 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 SNX5Q9Y5X3 404 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 CNTNAP2Q9UHC6 1331 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 DFFAO00273 331 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 ERBB2P04626 1255 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 PIK3R1P27986 724 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 MAPK10P53779 464 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 JAG1P78504 1218 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 ZBTB17Q13105 803 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 SFT2D3Q587I9 215 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 SLC39A4Q6P5W5 647 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 AMIGO3Q86WK7 504 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 CRYGNQ8WXF5 182 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 MRPS26Q9BYN8 205 aaKnown RBP12.77□□□□□ -0.37
RIOK3-201ENST00000339486 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.77□□□□□ -0.37
RIOK3-201ENST00000339486 VANGL2Q9ULK5 521 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 ACOT9Q9Y305 439 aa12.77□□□□□ -0.37
RIOK3-201ENST00000339486 A0A1B0GVG6 124 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 KDM1AO60341 852 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 RNASEH1O60930 286 aaKnown RBP12.76□□□□□ -0.37
RIOK3-201ENST00000339486 TOP3BO95985 862 aaKnown RBP12.76□□□□□ -0.37
RIOK3-201ENST00000339486 ATP1A4Q13733 1029 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 CDHR3Q6ZTQ4 885 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 AMIGO2Q86SJ2 522 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 PLD5Q8N7P1 536 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 ACMSDQ8TDX5 336 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 SLC4A5Q9BY07 1137 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 STN1Q9H668 368 aaKnown RBP12.76□□□□□ -0.37
RIOK3-201ENST00000339486 XPNPEP1Q9NQW7 623 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 DPP3Q9NY33 737 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 AP4S1Q9Y587 144 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 ZNF142P52746 1687 aaPredicted RBP12.76□□□□□ -0.37
RIOK3-201ENST00000339486 HEATR9A2RTY3 570 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 M0QYT0 321 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 E2F6O75461 281 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 GRTP1Q5TC63 336 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 FAM183BPQ6ZVS7 135 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 PRMT7Q9NVM4 692 aaPredicted RBP12.76□□□□□ -0.37
RIOK3-201ENST00000339486 SYNPO2Q9UMS6 1093 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 SYCE1LA8MT33 242 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 BHMG1C9JSJ3 638 aaPredicted RBP12.76□□□□□ -0.37
RIOK3-201ENST00000339486 OR6B1O95007 311 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 RPL14P50914 215 aaKnown RBP12.76□□□□□ -0.37
RIOK3-201ENST00000339486 GTF2A2P52657 109 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 GBE1Q04446 702 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 PATL1Q86TB9 770 aaKnown RBP12.76□□□□□ -0.37
RIOK3-201ENST00000339486 GJD4Q96KN9 370 aaPredicted RBP12.76□□□□□ -0.37
RIOK3-201ENST00000339486 FBXL18Q96ME1 805 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 LGMNQ99538 433 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 ARHGEF38Q9NXL2 777 aa12.76□□□□□ -0.37
RIOK3-201ENST00000339486 BARX2Q9UMQ3 279 aaPredicted RBP12.76□□□□□ -0.37
RIOK3-201ENST00000339486 SLIT2O94813 1529 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 NUP98P52948 1817 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 PKD1L3Q7Z443 1732 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 DHX15O43143 795 aaKnown RBP12.75□□□□□ -0.37
RIOK3-201ENST00000339486 DDHD2O94830 711 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 SUPT7LO94864 414 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 PSMB4P28070 264 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 PCYT1AP49585 367 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 SLC18A2Q05940 514 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 CAPSQ13938 189 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 Q3C1V9 767 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 TMEM63BQ5T3F8 832 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 FBXO27Q8NI29 283 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 SLC7A14Q8TBB6 771 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 TRAPPC12Q8WVT3 735 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 CPNE1Q99829 537 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 CYP3A43Q9HB55 503 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 TRPC7Q9HCX4 862 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 NCKIPSDQ9NZQ3 722 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 ZNF180Q9UJW8 692 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 SLCO1B7G3V0H7 640 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 VWA5AO00534 786 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 HDAC3O15379 428 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 ITM2AO43736 263 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 GRIN3BO60391 1043 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 PLIN3O60664 434 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 CHEK2O96017 543 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 FAM83EQ2M2I3 478 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 CLEC4FQ8N1N0 589 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 OR52K1Q8NGK4 314 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 CERS2Q96G23 380 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 NTPCRQ9BSD7 190 aaKnown RBP12.75□□□□□ -0.37
RIOK3-201ENST00000339486 MRIQ9BWK5 157 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 PLEKHA5Q9HAU0 1116 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 TMEM165Q9HC07 324 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 DNAJB4Q9UDY4 337 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 BAG5Q9UL15 447 aa12.75□□□□□ -0.37
RIOK3-201ENST00000339486 KIAA1257Q9ULG3 409 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms