RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 GAD1Q99259 594 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 CNGB3Q9NQW8 809 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 TLL2Q9Y6L7 1015 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 LOC100653049A0A140TA62 436 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 PIK3CDO00329 1044 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 RAD51BO15315 384 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 KRT34O76011 436 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 MTA2O94776 668 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 LTFP02788 710 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 USP17L7P0C7H9 530 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 PGAM1P18669 254 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 EIF4BP23588 611 aaKnown RBP7.9□□□□□ -1.14
TRIM2-201ENST00000338700 MLH1P40692 756 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 TREML2Q5T2D2 321 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 IRAK1BP1Q5VVH5 260 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 PLPPR4Q7Z2D5 763 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 VSIG10LQ86VR7 867 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 SCUBE3Q8IX30 993 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 PAWRQ96IZ0 340 aaKnown RBP7.9□□□□□ -1.14
TRIM2-201ENST00000338700 PPP1R10Q96QC0 940 aaKnown RBP7.9□□□□□ -1.14
TRIM2-201ENST00000338700 HPS4Q9NQG7 708 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 EVA1BQ9NVM1 165 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 ZMYND8Q9ULU4 1186 aaPredicted RBP7.9□□□□□ -1.14
TRIM2-201ENST00000338700 CAPN6Q9Y6Q1 641 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 SF3B1O75533 1304 aaKnown RBP eCLIP7.9□□□□□ -1.14
TRIM2-201ENST00000338700 MAPK9P45984 424 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 CSTF3Q12996 717 aaKnown RBP7.9□□□□□ -1.14
TRIM2-201ENST00000338700 DNAJC3Q13217 504 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 CYLC2Q14093 348 aaPredicted RBP7.9□□□□□ -1.14
TRIM2-201ENST00000338700 POU6F1Q14863 301 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 PAPD7Q5XG87 772 aaKnown RBP7.9□□□□□ -1.14
TRIM2-201ENST00000338700 ZBTB45Q96K62 511 aaPredicted RBP7.9□□□□□ -1.14
TRIM2-201ENST00000338700 SH3GL1Q99961 368 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 NCKIPSDQ9NZQ3 722 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 FBXO10Q9UK96 956 aa7.9□□□□□ -1.14
TRIM2-201ENST00000338700 SNTNA6NMZ2 147 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 CPSF4O95639 269 aaKnown RBP7.9□□□□□ -1.15
TRIM2-201ENST00000338700 FGFR1P11362 822 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 PTPN1P18031 435 aaKnown RBP7.9□□□□□ -1.15
TRIM2-201ENST00000338700 GRK2P25098 689 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 ATP5C1P36542 298 aaKnown RBP7.9□□□□□ -1.15
TRIM2-201ENST00000338700 GUCA1AP43080 201 aaPredicted RBP7.9□□□□□ -1.15
TRIM2-201ENST00000338700 PLOD1Q02809 727 aaPredicted RBP7.9□□□□□ -1.15
TRIM2-201ENST00000338700 C16orf59Q7L2K0 433 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 CCDC60Q8IWA6 550 aaPredicted RBP7.9□□□□□ -1.15
TRIM2-201ENST00000338700 VGLL2Q8N8G2 317 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 SUSD6Q92537 303 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 C18orf25Q96B23 403 aaPredicted RBP7.9□□□□□ -1.15
TRIM2-201ENST00000338700 LENG9Q96B70 501 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 FAM136AQ96C01 138 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 MED8Q96G25 268 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 ACTR8Q9H981 624 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 EFCAB1Q9HAE3 211 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 AVENQ9NQS1 362 aaPredicted RBP7.9□□□□□ -1.15
TRIM2-201ENST00000338700 RAD18Q9NS91 495 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 ARHGAP20Q9P2F6 1191 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 PADI4Q9UM07 663 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 TNFSF13BQ9Y275 285 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 MON2Q7Z3U7 1717 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 CCT8L1PA6NM43 557 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 PDZK1P1A8MUH7 402 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 ANKRD63C9JTQ0 380 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 TM9SF1O15321 606 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 CCL5P13501 91 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 CPA3P15088 417 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 AMPD1P23109 780 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 S100A5P33763 92 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 SCNN1GP51170 649 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 CDH8P55286 799 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 MAD2L1Q13257 205 aaPredicted RBP7.9□□□□□ -1.15
TRIM2-201ENST00000338700 FAM43BQ6ZT52 329 aaPredicted RBP7.9□□□□□ -1.15
TRIM2-201ENST00000338700 RD3Q7Z3Z2 195 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 ACTL9Q8TC94 416 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 VAT1Q99536 393 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 TKTL2Q9H0I9 626 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 SEPT3Q9UH03 358 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 VPS51Q9UID3 782 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 TMCC3Q9ULS5 477 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 RWDD3Q9Y3V2 267 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 V9GYQ6 96 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 SALL3Q9BXA9 1300 aa7.9□□□□□ -1.15
TRIM2-201ENST00000338700 O00370 1275 aa7.89□□□□□ -1.15
TRIM2-201ENST00000338700 FGF10O15520 208 aaPredicted RBP7.89□□□□□ -1.15
TRIM2-201ENST00000338700 KRT6AP02538 564 aa7.89□□□□□ -1.15
TRIM2-201ENST00000338700 ALBP02768 609 aa7.89□□□□□ -1.15
TRIM2-201ENST00000338700 KRT6BP04259 564 aa7.89□□□□□ -1.15
TRIM2-201ENST00000338700 CRABP2P29373 138 aa7.89□□□□□ -1.15
TRIM2-201ENST00000338700 KRT6CP48668 564 aa7.89□□□□□ -1.15
TRIM2-201ENST00000338700 NOMO2Q5JPE7 1267 aa7.89□□□□□ -1.15
TRIM2-201ENST00000338700 ARMC12Q5T9G4 340 aa7.89□□□□□ -1.15
TRIM2-201ENST00000338700 DEPDC1Q5TB30 811 aa7.89□□□□□ -1.15
TRIM2-201ENST00000338700 RBM43Q6ZSC3 357 aaKnown RBP7.89□□□□□ -1.15
TRIM2-201ENST00000338700 GALNT4Q8N4A0 578 aa7.89□□□□□ -1.15
TRIM2-201ENST00000338700 HNRNPLLQ8WVV9 542 aaKnown RBP7.89□□□□□ -1.15
TRIM2-201ENST00000338700 REPS1Q96D71 796 aa7.89□□□□□ -1.15
TRIM2-201ENST00000338700 AHCYL2Q96HN2 611 aaKnown RBP7.89□□□□□ -1.15
TRIM2-201ENST00000338700 SEZ6LQ9BYH1 1024 aa7.89□□□□□ -1.15
TRIM2-201ENST00000338700 CDC42EP4Q9H3Q1 356 aaKnown RBP7.89□□□□□ -1.15
TRIM2-201ENST00000338700 ARMC7Q9H6L4 198 aa7.89□□□□□ -1.15
TRIM2-201ENST00000338700 MIEF1Q9NQG6 463 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms