RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 MMP2P08253 660 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 SLC2A3P11169 496 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ATF6P18850 670 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 CR2P20023 1033 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 GARSP41250 739 aaKnown RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ADIGQ0VDE8 80 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 C15orf59Q2T9L4 293 aaPredicted RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 GALNTL6Q49A17 601 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 SYPL2Q5VXT5 272 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 IZUMO3Q5VZ72 239 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 RSPO2Q6UXX9 243 aaPredicted RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 TAC4Q86UU9 113 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 THEM5Q8N1Q8 247 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 RTL3Q8N8U3 475 aaKnown RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 UBA3Q8TBC4 463 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ADAMTS19Q8TE59 1207 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 ALKBH8Q96BT7 664 aaKnown RBP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 SERPINB11Q96P15 392 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 TMEM106CQ9BVX2 250 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 EPN3Q9H201 632 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 SEMA4AQ9H3S1 761 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 TREX1Q9NSU2 369 aa5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.54□□□□□ -1.52
PRPF4B-201ENST00000337659 LOC285095A0A1B0GVY8 99 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 HMX2A2RU54 273 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 MROH6A6NGR9 719 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 PRPSAP2O60256 369 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 CST8O60676 142 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 SNUPNO95149 360 aaKnown RBP5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 EPOP01588 193 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 GHRP10912 638 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 ALADP13716 330 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 RHOQP17081 205 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 EN2P19622 333 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 TKTL1P51854 596 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 SLC5A3P53794 718 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 MLLT6P55198 1093 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 YWHAGP61981 247 aaKnown RBP eCLIP5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 PPP2R2AP63151 447 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 RNASELQ05823 741 aaKnown RBP5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 ITIH4Q14624 930 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 INSCQ1MX18 579 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 MSS51Q4VC12 460 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 FNBP1LQ5T0N5 605 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 OVOS1Q6IE37 1185 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 GLB1LQ6UWU2 654 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 LRRC31Q6UY01 552 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 HFE2Q6ZVN8 426 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 EXOC3L1Q86VI1 746 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 METTL23Q86XA0 190 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 NUP93Q8N1F7 819 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 BANPQ8N9N5 519 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 FAM131CQ96AQ9 280 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 HAUS1Q96CS2 278 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 IGSF21Q96ID5 467 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 KLF16Q9BXK1 252 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 NFKBIL1Q9UBC1 381 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 ST14Q9Y5Y6 855 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 TSPAN11A1L157 253 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 MAGEB16A2A368 324 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 MCF2LO15068 1137 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 TM9SF1O15321 606 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 CDH16O75309 829 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 TGDSO95455 350 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 ATP5DP30049 168 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 MAGEA4P43358 317 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 IRAK1P51617 712 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 IRX1P78414 480 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 SLC7A9P82251 487 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 PDK1Q15118 436 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 TMEM184AQ6ZMB5 413 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 ARHGEF18Q6ZSZ5 1173 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 DDX42Q86XP3 938 aaKnown RBP eCLIP5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 GSPT2Q8IYD1 628 aaKnown RBP5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 NPWQ8N729 165 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 ALG14Q96F25 216 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 ULBP1Q9BZM6 244 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 SSX2IPQ9Y2D8 614 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 FAN1Q9Y2M0 1017 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 NR2E3Q9Y5X4 410 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 FAM237BA0A1B0GVD1 139 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 MATN3O15232 486 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 USP1O94782 785 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 LCP1P13796 627 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 DRD4P21917 467 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 CES1P23141 567 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 OSTNP61366 133 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 ANKRD22Q5VYY1 191 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 PDE12Q6L8Q7 609 aaKnown RBP5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 SCUBE3Q8IX30 993 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 KLHL7Q8IXQ5 586 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 ARFGAP2Q8N6H7 521 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 COLGALT1Q8NBJ5 622 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 CKAP2Q8WWK9 683 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 RIN2Q8WYP3 895 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 TEKT5Q96M29 485 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 TRIM6Q9C030 488 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 TWSG1Q9GZX9 223 aa5.53□□□□□ -1.52
PRPF4B-201ENST00000337659 IL21Q9HBE4 155 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms