RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 HJURPQ8NCD3 748 aaPredicted RBP15.89■□□□□ 0.13
SEC13-201ENST00000337354 TTC8Q8TAM2 541 aa15.89■□□□□ 0.13
SEC13-201ENST00000337354 OR12D3Q9UGF7 316 aa15.89■□□□□ 0.13
SEC13-201ENST00000337354 PCSK1NQ9UHG2 260 aa15.89■□□□□ 0.13
SEC13-201ENST00000337354 TFR2Q9UP52 801 aa15.89■□□□□ 0.13
SEC13-201ENST00000337354 MRPS17Q9Y2R5 130 aaKnown RBP15.89■□□□□ 0.13
SEC13-201ENST00000337354 NEDD8-MDP1E9PL57 170 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 CACNG3O60359 315 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 TSPAN3O60637 253 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 GPR37L1O60883 481 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 L1CAMP32004 1257 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 CTHP32929 405 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 HTR7P34969 479 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 NAP1L1P55209 391 aaKnown RBP15.88■□□□□ 0.13
SEC13-201ENST00000337354 RFWD3Q6PCD5 774 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 NUDT18Q6ZVK8 323 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 CCDC117Q8IWD4 279 aaPredicted RBP15.88■□□□□ 0.13
SEC13-201ENST00000337354 SUGP1Q8IWZ8 645 aaKnown RBP15.88■□□□□ 0.13
SEC13-201ENST00000337354 LGI2Q8N0V4 545 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 UBE2Q2Q8WVN8 375 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 TEKT4Q8WW24 435 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 FAM3CQ92520 227 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 RPRD1AQ96P16 312 aaPredicted RBP15.88■□□□□ 0.13
SEC13-201ENST00000337354 LRFN3Q9BTN0 628 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 PPARGC1AQ9UBK2 798 aaKnown RBP15.88■□□□□ 0.13
SEC13-201ENST00000337354 FBXO10Q9UK96 956 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 CA14Q9ULX7 337 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 DUSP10Q9Y6W6 482 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 KMT2EQ8IZD2 1858 aa15.88■□□□□ 0.13
SEC13-201ENST00000337354 IGLV3-10A0A075B6K4 115 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 PRR33A8MZF0 331 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 TRDMT1O14717 391 aaKnown RBP15.87■□□□□ 0.13
SEC13-201ENST00000337354 KRT7P08729 469 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 VCPP55072 806 aaKnown RBP15.87■□□□□ 0.13
SEC13-201ENST00000337354 GAB4Q2WGN9 574 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 RNF43Q68DV7 783 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 C11orf63Q6NUN7 778 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 TPRG1Q6ZUI0 275 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 ETFBKMTQ8IXQ9 262 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 ZNF683Q8IZ20 524 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 SIX5Q8N196 739 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 TPCN2Q8NHX9 752 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 P2RY13Q9BPV8 354 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 TMPRSS4Q9NRS4 437 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 DEC1Q9P2X7 70 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 SALL4Q9UJQ4 1053 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 VANGL2Q9ULK5 521 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 ALG6Q9Y672 507 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 HELZP42694 1942 aaKnown RBP15.87■□□□□ 0.13
SEC13-201ENST00000337354 TICRRQ7Z2Z1 1910 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 A0A0A0MRY4 1105 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 A0A1B0GVM2 712 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 KRBA1A5PL33 1030 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 TCAF2A6NFQ2 919 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 E9PAM4 449 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 BUB1BO60566 1050 aaPredicted RBP15.87■□□□□ 0.13
SEC13-201ENST00000337354 TBL1XO60907 577 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 SRGAP2O75044 1071 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 CLDN11O75508 207 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 HOXD9P28356 352 aaPredicted RBP15.87■□□□□ 0.13
SEC13-201ENST00000337354 OPRD1P41143 372 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 SSR1P43307 286 aaKnown RBP15.87■□□□□ 0.13
SEC13-201ENST00000337354 SOX9P48436 509 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 GALK1P51570 392 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 CDH4P55283 916 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 OXCT1P55809 520 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 RPS24P62847 133 aaKnown RBP15.87■□□□□ 0.13
SEC13-201ENST00000337354 SLC25A11Q02978 314 aaKnown RBP15.87■□□□□ 0.13
SEC13-201ENST00000337354 IER5LQ5T953 404 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 LRRC38Q5VT99 294 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 POLNQ7Z5Q5 900 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 C14orf80Q86SX3 495 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 CD101Q93033 1021 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 CHFRQ96EP1 664 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 PRICKLE1Q96MT3 831 aaPredicted RBP15.87■□□□□ 0.13
SEC13-201ENST00000337354 ZNF830Q96NB3 372 aaPredicted RBP15.87■□□□□ 0.13
SEC13-201ENST00000337354 PNKPQ96T60 521 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 EPAS1Q99814 870 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 SNRNP25Q9BV90 132 aaKnown RBP15.87■□□□□ 0.13
SEC13-201ENST00000337354 OSBPL6Q9BZF3 934 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 ZYG11BQ9C0D3 744 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 KCNF1Q9H3M0 494 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 DONSONQ9NYP3 566 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 PLK2Q9NYY3 685 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 AP4E1Q9UPM8 1137 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 SLC27A6Q9Y2P4 619 aa15.87■□□□□ 0.13
SEC13-201ENST00000337354 KANSL1LA0AUZ9 987 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 TMEM110-MUSTN1A8MSY1 372 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 ZSCAN12O43309 604 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 BUB1O43683 1085 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 TULP3O75386 442 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 RARAP10276 462 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 DRD1P21728 446 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 IL1R2P27930 398 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 HCAR3P49019 387 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 GRSF1Q12849 480 aaKnown RBP eCLIP15.86■□□□□ 0.13
SEC13-201ENST00000337354 DPYSL2Q16555 572 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 TMEM196Q5HYL7 178 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 MANEALQ5VSG8 457 aa15.86■□□□□ 0.13
SEC13-201ENST00000337354 CYP4V2Q6ZWL3 525 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms