RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 FAM193BQ96PV7 902 aaPredicted RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 GCNAQ96QF7 691 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 CADM1Q9BY67 442 aaKnown RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 ADARB2Q9NS39 739 aaKnown RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 SYBUQ9NX95 663 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 ETAA1Q9NY74 926 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 RBPJLQ9UBG7 517 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 PSAT1Q9Y617 370 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 SNCAIPQ9Y6H5 919 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 SCN9AQ15858 1988 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 NUP205Q92621 2012 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 IQCA1LA6NCM1 817 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 C5orf60A6NFR6 353 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 C9IYK1 514 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 TREHO43280 583 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 MSI1O43347 362 aaKnown RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 CILPO75339 1184 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 MT-CYBP00156 380 aaPredicted RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 FAM200BP0CF97 657 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 TPD52P55327 224 aaPredicted RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 GJA9P57773 515 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 SWT1Q5T5J6 900 aaKnown RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 BTBD8Q5XKL5 378 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 HFE2Q6ZVN8 426 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 ARFGAP1Q8N6T3 406 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 CEP70Q8NHQ1 597 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 ABTB1Q969K4 478 aaPredicted RBP8.45□□□□□ -1.06
HPS4-201ENST00000336873 ATP6V1E2Q96A05 226 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 TRPV6Q9H1D0 765 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 DCLRE1BQ9H816 532 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 MPP6Q9NZW5 540 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 SFMBT1Q9UHJ3 866 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 STARD13Q9Y3M8 1113 aa8.45□□□□□ -1.06
HPS4-201ENST00000336873 MEIS3P2A8K0S8 358 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 A8MX80 341 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 MAGEB2O15479 319 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 ITM2AO43736 263 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 MFSD11O43934 449 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 SORBS2O94875 1100 aaKnown RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 PAEPP09466 180 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 CPA3P15088 417 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 SCNN1GP51170 649 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 CDK16Q00536 496 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 SNAPC2Q13487 334 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 TAF1CQ15572 869 aaPredicted RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 OASLQ15646 514 aaKnown RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 RHBDF2Q6PJF5 856 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 OTOP3Q7RTS5 596 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 RIOX2Q8IUF8 465 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 TEKT4Q8WW24 435 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 NMD3Q96D46 503 aaKnown RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 TXLNGYQ9BZA5 131 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 TKTL2Q9H0I9 626 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 TMEM134Q9H6X4 195 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 SLC12A4Q9UP95 1085 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 XPO1O14980 1071 aaKnown RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 SMNDC1O75940 238 aaKnown RBP eCLIP8.44□□□□□ -1.06
HPS4-201ENST00000336873 SUPT7LO94864 414 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 ERCC2P18074 760 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 BRCC3P46736 316 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 COPAP53621 1224 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 HADHBP55084 474 aaKnown RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 MRPS22P82650 360 aaKnown RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 NRF1Q16656 503 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 ACSBG2Q5FVE4 666 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 CGB2Q6NT52 195 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 FASTKD5Q7L8L6 764 aaKnown RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 HPS6Q86YV9 775 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 EFHBQ8N7U6 833 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 BLOC1S5Q8TDH9 187 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 RMDN1Q96DB5 314 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 ZMAT2Q96NC0 199 aaKnown RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 ADGRA2Q96PE1 1338 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 PDZD7Q9H5P4 517 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 CCDC167Q9P0B6 97 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 PCDH10Q9P2E7 1040 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 VANGL2Q9ULK5 521 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 BTAF1O14981 1849 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 C3orf70A6NLC5 250 aaPredicted RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 TNPO2O14787 897 aaKnown RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 GSC2O15499 205 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 MTA2O94776 668 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 CELF2O95319 508 aaKnown RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 YBX3P16989 372 aaKnown RBP eCLIP8.44□□□□□ -1.06
HPS4-201ENST00000336873 THPOP40225 353 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 VHLP40337 213 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 MAPK10P53779 464 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 MBTD1Q05BQ5 628 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 PDE1CQ14123 709 aaPredicted RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 TMEM198Q66K66 360 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 SCIMPQ6UWF3 145 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 CCNJLQ8IV13 435 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 EXOC8Q8IYI6 725 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 GPC2Q8N158 579 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 ARL10Q8N8L6 244 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 C12orf50Q8NA57 414 aaPredicted RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 SLC35B2Q8TB61 432 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 EXOC2Q96KP1 924 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 CYP2S1Q96SQ9 504 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 XYLT2Q9H1B5 865 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms