RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 GREM1O60565 184 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 BEST1O76090 585 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 WISP1O95388 367 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 LATS1O95835 1130 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 IGLV1-40P01703 118 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 CCDC192P0DO97 292 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 GLB1P16278 677 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 ZNF16P17020 682 aaPredicted RBP6.65□□□□□ -1.35
SMG1-201ENST00000330588 SSTR4P31391 388 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 GALK1P51570 392 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 ZNF445P59923 1031 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 COG7P83436 770 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 ATP11AP98196 1134 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 SATB1Q01826 763 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 GAD2Q05329 585 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 BST2Q10589 180 aaKnown RBP6.65□□□□□ -1.35
SMG1-201ENST00000330588 HYAL2Q12891 473 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 DHCR24Q15392 516 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 CCDC40Q4G0X9 1142 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 SGO2Q562F6 1265 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 DCAF17Q5H9S7 520 aaPredicted RBP6.65□□□□□ -1.35
SMG1-201ENST00000330588 TRIM68Q6AZZ1 485 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 ADAMTSL4Q6UY14 1074 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 TRMT11Q7Z4G4 463 aaKnown RBP6.65□□□□□ -1.35
SMG1-201ENST00000330588 C12orf29Q8N999 325 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 SCAMP5Q8TAC9 235 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 USP33Q8TEY7 942 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 HEXIM2Q96MH2 286 aaKnown RBP6.65□□□□□ -1.35
SMG1-201ENST00000330588 PNKPQ96T60 521 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 DCLK3Q9C098 648 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 KCNK4Q9NYG8 393 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 CFAP97Q9P2B7 532 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 WDR35Q9P2L0 1181 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 HESX1Q9UBX0 185 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 LSM7Q9UK45 103 aaKnown RBP6.65□□□□□ -1.35
SMG1-201ENST00000330588 RAB23Q9ULC3 237 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 SMG5Q9UPR3 1016 aaKnown RBP6.65□□□□□ -1.35
SMG1-201ENST00000330588 SH3BP1Q9Y3L3 701 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 WNT6Q9Y6F9 365 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 R4GN57 208 aa6.65□□□□□ -1.35
SMG1-201ENST00000330588 PRR5-ARHGAP8B1AHC4 643 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 LINC01387J3KSC0 135 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 O00370 1275 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 NPC1O15118 1278 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 CACNG3O60359 315 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 MED26O95402 600 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 EGFP01133 1207 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 ADH5P11766 374 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 CD58P19256 250 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 ACO1P21399 889 aaKnown RBP6.64□□□□□ -1.35
SMG1-201ENST00000330588 ADORA2BP29275 332 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 CD68P34810 354 aaPredicted RBP6.64□□□□□ -1.35
SMG1-201ENST00000330588 CHKAP35790 457 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 ANP32AP39687 249 aaKnown RBP6.64□□□□□ -1.35
SMG1-201ENST00000330588 GRIA2P42262 883 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 RPL34P49207 117 aaKnown RBP6.64□□□□□ -1.35
SMG1-201ENST00000330588 ARHGAP8P85298 464 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 CNGA2Q16280 664 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 RHBDF2Q6PJF5 856 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 LCLAT1Q6UWP7 414 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 Q6ZS52 159 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 BEND5Q7L4P6 421 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 ERMP1Q7Z2K6 904 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 FAM217AQ8IXS0 508 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 CPXM2Q8N436 756 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 TTC16Q8NEE8 873 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 GAB3Q8WWW8 586 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 IRGQQ8WZA9 623 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 ZC3H10Q96K80 434 aaKnown RBP6.64□□□□□ -1.35
SMG1-201ENST00000330588 TRIM62Q9BVG3 475 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 LINC00597Q9H2U6 94 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 CCSER2Q9H7U1 834 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 CNGB3Q9NQW8 809 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 SPHK2Q9NRA0 654 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 TMEM51Q9NW97 253 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 GMEB2Q9UKD1 530 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 MMP17Q9ULZ9 603 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 SLC8A2Q9UPR5 921 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 CTNND2Q9UQB3 1225 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 PCDHGA5Q9Y5G8 931 aa6.64□□□□□ -1.35
SMG1-201ENST00000330588 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMG1-201ENST00000330588 PLXND1Q9Y4D7 1925 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 MYH10P35580 1976 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 GFRA2O00451 464 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 EREGO14944 169 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 CYP26A1O43174 497 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 SART1O43290 800 aaKnown RBP6.63□□□□□ -1.35
SMG1-201ENST00000330588 GADD45BO75293 160 aaPredicted RBP6.63□□□□□ -1.35
SMG1-201ENST00000330588 FBXO21O94952 628 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 APBB3O95704 486 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 ZBED1O96006 694 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 AFPP02771 609 aaKnown RBP6.63□□□□□ -1.35
SMG1-201ENST00000330588 APODP05090 189 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 RETP07949 1114 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 RARGP13631 454 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 ERCC5P28715 1186 aaPredicted RBP6.63□□□□□ -1.35
SMG1-201ENST00000330588 CDR1P51861 262 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 DGKEP52429 567 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 ZNF132P52740 706 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 SPDYCQ5MJ68 293 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms