RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 IFNB1P01574 187 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 APOEP02649 317 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 ERBB2P04626 1255 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 CALB1P05937 261 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 KRT7P08729 469 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 PRKAA2P54646 552 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 ABCE1P61221 599 aaKnown RBP8.6□□□□□ -1.03
SKA2-201ENST00000330137 NOMO3P69849 1222 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 CDC20Q12834 499 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 ATP1A4Q13733 1029 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 E2F2Q14209 437 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 SMUG1Q53HV7 270 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 TMEM214Q6NUQ4 689 aaKnown RBP8.6□□□□□ -1.03
SKA2-201ENST00000330137 NDUFAF2Q8N183 169 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 GALNT4Q8N4A0 578 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 SNX31Q8N9S9 440 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 SLC44A5Q8NCS7 719 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 MCUQ8NE86 351 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 ANKK1Q8NFD2 765 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 OR7G1Q8NGA0 311 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 TGFBRAP1Q8WUH2 860 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 TRIB2Q92519 343 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 MAGED4Q96JG8 741 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 CDH19Q9H159 772 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 COQ10BQ9H8M1 238 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 THG1LQ9NWX6 298 aaKnown RBP8.6□□□□□ -1.03
SKA2-201ENST00000330137 SERPINB13Q9UIV8 391 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 PCDHB12Q9Y5F1 795 aa8.6□□□□□ -1.03
SKA2-201ENST00000330137 HEMK1Q9Y5R4 338 aaPredicted RBP8.6□□□□□ -1.03
SKA2-201ENST00000330137 FRMPD2Q68DX3 1309 aaPredicted RBP8.59□□□□□ -1.03
SKA2-201ENST00000330137 ANKRD34BA5PLL1 514 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 SLCO1B7G3V0H7 640 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 GOLGA8SH3BPF8 625 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 GOLGA8MH3BSY2 632 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 BANF1O75531 89 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 KRT75O95678 551 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 BCL10O95999 233 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 KRT10P13645 584 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 THOP1P52888 689 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 PTK2BQ14289 1009 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 CYP2A13Q16696 494 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 FAM47CQ5HY64 1035 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 TTC33Q6PID6 262 aaPredicted RBP8.59□□□□□ -1.03
SKA2-201ENST00000330137 OTOP1Q7RTM1 612 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 MAVSQ7Z434 540 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 CAMK1DQ8IU85 385 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 ABRAQ8N0Z2 381 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 SLC15A4Q8N697 577 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 LILRB4Q8NHJ6 448 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 USP33Q8TEY7 942 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 RASSF5Q8WWW0 418 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 TMA16Q96EY4 203 aaKnown RBP8.59□□□□□ -1.03
SKA2-201ENST00000330137 NRBF2Q96F24 287 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 VMP1Q96GC9 406 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 FEM1CQ96JP0 617 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 MFSD14AQ96MC6 490 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 SLC4A9Q96Q91 983 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 CDRT15Q96T59 188 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 SORT1Q99523 831 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 FAM118BQ9BPY3 351 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 ADAM33Q9BZ11 813 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 WDR11Q9BZH6 1224 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 CPNE5Q9HCH3 593 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.59□□□□□ -1.03
SKA2-201ENST00000330137 DAPK2Q9UIK4 370 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 CNTN6Q9UQ52 1028 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 TIMM22Q9Y584 194 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 GREB1LQ9C091 1923 aaPredicted RBP8.59□□□□□ -1.03
SKA2-201ENST00000330137 LRRIQ4A6NIV6 560 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 TBKBP1A7MCY6 615 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 SFI1A8K8P3 1242 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 PAPSS1O43252 624 aaPredicted RBP8.59□□□□□ -1.03
SKA2-201ENST00000330137 TOM1L1O75674 476 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 RNASEH2AO75792 299 aaKnown RBP8.59□□□□□ -1.03
SKA2-201ENST00000330137 KRT6AP02538 564 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 KRT6BP04259 564 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 UGT2B4P06133 528 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 XRCC1P18887 633 aaPredicted RBP8.59□□□□□ -1.03
SKA2-201ENST00000330137 NCF2P19878 526 aaPredicted RBP8.59□□□□□ -1.03
SKA2-201ENST00000330137 EPHA3P29320 983 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 CTBSQ01459 385 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 AARS2Q5JTZ9 985 aaKnown RBP8.59□□□□□ -1.03
SKA2-201ENST00000330137 SLC10A5Q5PT55 438 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 IGFN1Q86VF2 1251 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 ANKRD13AQ8IZ07 590 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 ADGRF2Q8IZF7 708 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 PPM1NQ8N819 430 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 FLAD1Q8NFF5 587 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 SEMA4DQ92854 862 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 RTP4Q96DX8 246 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 FBXL18Q96ME1 805 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 ZNF512Q96ME7 567 aaPredicted RBP8.59□□□□□ -1.03
SKA2-201ENST00000330137 DCUN1D5Q9BTE7 237 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 ZNF518BQ9C0D4 1074 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 ARMC1Q9NVT9 282 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 GPRC5DQ9NZD1 345 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 PAK5Q9P286 719 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 PSME2Q9UL46 239 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 IRS2Q9Y4H2 1338 aa8.59□□□□□ -1.03
SKA2-201ENST00000330137 MYOCOSA0A1B0GUC4 107 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms