RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 LYPD6Q86Y78 171 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 PHACTR4Q8IZ21 702 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 DEPDC4Q8N2C3 294 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 CENPSQ8N2Z9 138 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 MRPL38Q96DV4 380 aaKnown RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 KIFC1Q9BW19 673 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 LRRC27Q9C0I9 530 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 IMPACTQ9P2X3 320 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 TMPRSS11EQ9UL52 423 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 CLDN16Q9Y5I7 305 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 LOC105371267A0A1B0GV96 52 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 TARSL2A2RTX5 802 aaKnown RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 OR2W5A6NFC9 320 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 TNFSF12O43508 249 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 F11P03951 625 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 ALDOAP04075 364 aaKnown RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 TP53P04637 393 aaPredicted RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 RPN1P04843 607 aaKnown RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 FESP07332 822 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 EPB42P16452 691 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 HSD3B2P26439 372 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 MSX2P35548 267 aaPredicted RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 CYLC1P35663 651 aaPredicted RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 HSD17B3P37058 310 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 MAGEA11P43364 429 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 PER3P56645 1201 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 PTK2BQ14289 1009 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 PIGHQ14442 188 aaPredicted RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 CYP2U1Q7Z449 544 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 BOLLQ8N9W6 283 aaKnown RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 C3orf20Q8ND61 904 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 DQX1Q8TE96 717 aaKnown RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 IPCEF1Q8WWN9 437 aaPredicted RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 GATAD2BQ8WXI9 593 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 IQCDQ96DY2 449 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 DOCK7Q96N67 2140 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 SH3GL3Q99963 347 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 CELF4Q9BZC1 486 aaKnown RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 AS3MTQ9HBK9 375 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 TMEM8AQ9HCN3 771 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 VCX3AQ9NNX9 186 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 GPCPD1Q9NPB8 672 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 JADE2Q9NQC1 790 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 CNGB3Q9NQW8 809 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 DDX19AQ9NUU7 478 aaKnown RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 RNF19AQ9NV58 838 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 SUN2Q9UH99 717 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 APOBEC2Q9Y235 224 aaKnown RBP2.68□□□□□ -1.98
RGPD6-201ENST00000329516 LRCH1Q9Y2L9 728 aa2.68□□□□□ -1.98
RGPD6-201ENST00000329516 PTPN13Q12923 2485 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 TBC1D3DA0A087WVF3 549 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 TBC1D3IA0A087WXS9 549 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 TBC1D3EA0A087X179 549 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 TBC1D3KA0A087X1G2 549 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 SHISA3A0PJX4 238 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 ARHGEF37A1IGU5 675 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 TBC1D3BA6NDS4 549 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 TBC1D3FA6NER0 549 aaPredicted RBP2.67□□□□□ -1.98
RGPD6-201ENST00000329516 SMCO2A6NFE2 343 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 TBC1D3LB9A6J9 549 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 ENPP3O14638 875 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 SMIM24O75264 130 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 KRT19P08727 400 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 TBC1D3HP0C7X1 549 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 ANPEPP15144 967 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 C4BPBP20851 252 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 HDAC4P56524 1084 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 GUCY1A3Q02108 690 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 FKBP4Q02790 459 aaKnown RBP eCLIP2.67□□□□□ -1.98
RGPD6-201ENST00000329516 SRSF11Q05519 484 aaKnown RBP2.67□□□□□ -1.98
RGPD6-201ENST00000329516 NFX1Q12986 1120 aaKnown RBP2.67□□□□□ -1.98
RGPD6-201ENST00000329516 LAMC2Q13753 1193 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 NCF4Q15080 339 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 AOC3Q16853 763 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 TAF1BQ53T94 588 aaPredicted RBP2.67□□□□□ -1.98
RGPD6-201ENST00000329516 TBC1D3GQ6DHY5 549 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 TBC1D3CQ6IPX1 549 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 LAYNQ6UX15 382 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 NAPRTQ6XQN6 538 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 GADL1Q6ZQY3 521 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 MYLK4Q86YV6 388 aaPredicted RBP2.67□□□□□ -1.98
RGPD6-201ENST00000329516 EFCAB13Q8IY85 973 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 TBC1D3Q8IZP1 549 aaPredicted RBP2.67□□□□□ -1.98
RGPD6-201ENST00000329516 SIX5Q8N196 739 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 TPCN2Q8NHX9 752 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 C10orf82Q8WW14 230 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 MAELQ96JY0 434 aaKnown RBP2.67□□□□□ -1.98
RGPD6-201ENST00000329516 PRMT6Q96LA8 375 aaPredicted RBP2.67□□□□□ -1.98
RGPD6-201ENST00000329516 HARBI1Q96MB7 349 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 ACOX2Q99424 681 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 CHST8Q9H2A9 424 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 CACYBPQ9HB71 228 aaKnown RBP2.67□□□□□ -1.98
RGPD6-201ENST00000329516 PARVGQ9HBI0 331 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 TBC1D22BQ9NU19 505 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 RPS6KA6Q9UK32 745 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 KDM3AQ9Y4C1 1321 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 CAPN8A6NHC0 703 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 POC1B-GALNT4F8VUJ3 575 aa2.67□□□□□ -1.98
RGPD6-201ENST00000329516 RAD51CO43502 376 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms