RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 SH3D19Q5HYK7 790 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 SYCP2LQ5T4T6 812 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 POTEHQ6S545 545 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 PACS1Q6VY07 963 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 ZPBP2Q6X784 338 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 BNC2Q6ZN30 1099 aaPredicted RBP11.57□□□□□ -0.56
GINS3-202ENST00000328514 RSPH3Q86UC2 560 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 VSIG10LQ86VR7 867 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 PQLC3Q8N755 202 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 SMYD1Q8NB12 490 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 ZNF597Q96LX8 424 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 LENG8Q96PV6 779 aaPredicted RBP11.57□□□□□ -0.56
GINS3-202ENST00000328514 RMDN3Q96TC7 470 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 FERMT1Q9BQL6 677 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 TARS2Q9BW92 718 aaKnown RBP11.57□□□□□ -0.56
GINS3-202ENST00000328514 SHCBP1LQ9BZQ2 653 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 XYLT2Q9H1B5 865 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 COG4Q9H9E3 785 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 PLGRKTQ9HBL7 147 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 SLC38A10Q9HBR0 1119 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 TMOD2Q9NZR1 351 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 FBXO40Q9UH90 709 aa11.57□□□□□ -0.56
GINS3-202ENST00000328514 SEPT9Q9UHD8 586 aaPredicted RBP11.57□□□□□ -0.56
GINS3-202ENST00000328514 hCG_2014768A0A024R1R8 64 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 THOP1P52888 689 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 DUOXA2Q1HG44 320 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 TMEM132AQ24JP5 1023 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 ZNF394Q53GI3 561 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 BOLA3Q53S33 107 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 C6orf52Q5T4I8 152 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 VWA5B1Q5TIE3 1220 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 IYDQ6PHW0 289 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 CDKL3Q8IVW4 592 aaPredicted RBP11.56□□□□□ -0.56
GINS3-202ENST00000328514 DSELQ8IZU8 1212 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 PGAM4Q8N0Y7 254 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 TSPAN14Q8NG11 270 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 CEP70Q8NHQ1 597 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 SLC7A14Q8TBB6 771 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.56□□□□□ -0.56
GINS3-202ENST00000328514 NLRP7Q8WX94 980 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 CDKL2Q92772 493 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 PRMT6Q96LA8 375 aaPredicted RBP11.56□□□□□ -0.56
GINS3-202ENST00000328514 TRIM56Q9BRZ2 755 aaKnown RBP11.56□□□□□ -0.56
GINS3-202ENST00000328514 ZNF341Q9BYN7 854 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 VPS33BQ9H267 617 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 XPNPEP3Q9NQH7 507 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 TRIM64CA6NLI5 447 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 C2CD4BA6NLJ0 364 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 ACOT8O14734 319 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 APOL1O14791 398 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 H2AFYO75367 372 aaKnown RBP11.56□□□□□ -0.56
GINS3-202ENST00000328514 TADA2AO75478 443 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 H6PDO95479 791 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 MYCLP12524 364 aaPredicted RBP11.56□□□□□ -0.56
GINS3-202ENST00000328514 PSMC3P17980 439 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 XRCC1P18887 633 aaPredicted RBP11.56□□□□□ -0.56
GINS3-202ENST00000328514 PIK3R1P27986 724 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 BCAR1P56945 870 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 NUP107P57740 925 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 MRPS22P82650 360 aaKnown RBP11.56□□□□□ -0.56
GINS3-202ENST00000328514 PLOD1Q02809 727 aaPredicted RBP11.56□□□□□ -0.56
GINS3-202ENST00000328514 TMED1Q13445 227 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 PEX6Q13608 980 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 SWSAP1Q6NVH7 229 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 ABHD15Q6UXT9 468 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 TRIM67Q6ZTA4 783 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 CARM1Q86X55 608 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 RNF168Q8IYW5 571 aaPredicted RBP11.56□□□□□ -0.56
GINS3-202ENST00000328514 MPP5Q8N3R9 675 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 EFCAB3Q8N7B9 438 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 DEPTORQ8TB45 409 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 HM13Q8TCT9 377 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 FAM151AQ8WW52 585 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 TBCBQ99426 244 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 PKP2Q99959 881 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 OSBPL11Q9BXB4 747 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 ZNF385DQ9H6B1 395 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 PRDM16Q9HAZ2 1276 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 IGSF9Q9P2J2 1179 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 WDR37Q9Y2I8 494 aa11.56□□□□□ -0.56
GINS3-202ENST00000328514 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.55□□□□□ -0.56
GINS3-202ENST00000328514 KANSL1LA0AUZ9 987 aa11.55□□□□□ -0.56
GINS3-202ENST00000328514 TESPA1A2RU30 521 aaPredicted RBP11.55□□□□□ -0.56
GINS3-202ENST00000328514 FAM155AB1AL88 458 aaPredicted RBP11.55□□□□□ -0.56
GINS3-202ENST00000328514 WDR46O15213 610 aaKnown RBP11.55□□□□□ -0.56
GINS3-202ENST00000328514 CBFA2T3O75081 653 aa11.55□□□□□ -0.56
GINS3-202ENST00000328514 ZMPSTE24O75844 475 aa11.55□□□□□ -0.56
GINS3-202ENST00000328514 BMP10O95393 424 aa11.55□□□□□ -0.56
GINS3-202ENST00000328514 METTL18O95568 372 aa11.55□□□□□ -0.56
GINS3-202ENST00000328514 EDN1P05305 212 aa11.55□□□□□ -0.56
GINS3-202ENST00000328514 GPD1P21695 349 aa11.55□□□□□ -0.56
GINS3-202ENST00000328514 ME2P23368 584 aa11.55□□□□□ -0.56
GINS3-202ENST00000328514 PSMD8P48556 350 aa11.55□□□□□ -0.56
GINS3-202ENST00000328514 NUDT2P50583 147 aa11.55□□□□□ -0.56
GINS3-202ENST00000328514 CBX3Q13185 183 aa11.55□□□□□ -0.56
GINS3-202ENST00000328514 CEACAM7Q14002 265 aa11.55□□□□□ -0.56
GINS3-202ENST00000328514 SLC9B1Q4ZJI4 515 aa11.55□□□□□ -0.56
GINS3-202ENST00000328514 AMIGO2Q86SJ2 522 aa11.55□□□□□ -0.56
GINS3-202ENST00000328514 CCDC60Q8IWA6 550 aaPredicted RBP11.55□□□□□ -0.56
GINS3-202ENST00000328514 PDCD6IPQ8WUM4 868 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms